Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1383 ATGGAGGTGGACATATTGAGCAGACTAGACCACCCAAATCTTGTTTCCTTGATTGGCTACTGTGCTGATGGAAAGCACAGATTCTTAGTATATGAGTATATGCAAAATGGGAACCTACAACATCATCTGAATGGAATTGGGGAAAGAAAAATGGATTGGCCTCTAAGGCTGAAAGTGGCATTAGGAGCTGCAAAAGGACTTGCTTATCTGCATTCAAGCTCTTCTGTTGGGATCCCTATTATTCACAGAGATTTCAAATCCACCAATGTTCTTTTAACCTCCAATTTTGAAGCAAAGATATCTGATTTCGGGCTAGCTAAACTGATGCCAGAAGGACAAGAGACACATGTAACTGCTAGAGTGGTTGTGAAGACTGGTCCTAGCAGTTTTGCTGATGCTGTTGTTGGGAGGATTGATCAGAGTACAAAGGTTCTTGCAGAAGGTGCTTATGAGAAGATCTTCAGTGATAACCCACTTTCTTACCAAACGGGTGATCAGACTCAGTCGAGCTATTATAAGAAGCTATTGAACAAAACATATCACAGAAGAAAGATAAAAGAAGAAAGGAAATCAGGTGCAATAAATAGTCAGCATTATGAGGAAGATCTAGAATTGCCCTTATTTGATATGTGCACAATTACTCTTAGAACAAGTAATTTTTCAAGTGACAATATACTAGGGACATGTGGTTTTGGATCAGTTTATAAGATGTAG 714 0.3908 MEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMQNGNLQHHLNGIGERKMDWPLRLKVALGAAKGLAYLHSSSSVGIPIIHRDFKSTNVLLTSNFEAKISDFGLAKLMPEGQETHVTARVVVKTGPSSFADAVVGRIDQSTKVLAEGAYEKIFSDNPLSYQTGDQTQSSYYKKLLNKTYHRRKIKEERKSGAINSQHYEEDLELPLFDMCTITLRTSNFSSDNILGTCGFGSVYKM* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1383 237 Pfam Protein tyrosine and serine/threonine kinase 2 116 IPR001245 GO:0004672|GO:0006468
Ahy12g1383 237 PANTHER OS01G0750732 PROTEIN 2 127 - -
Ahy12g1383 237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 80 92 IPR008271 GO:0004672|GO:0006468
Ahy12g1383 237 ProSiteProfiles Protein kinase domain profile. 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1383 237 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL28-RELATED 2 127 - -
Ahy12g1383 237 SUPERFAMILY Protein kinase-like (PK-like) 2 119 IPR011009 -
Ahy12g1383 237 Gene3D Transferase(Phosphotransferase) domain 1 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1383 Ahy-Chr12 63200887 63203184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1383 1 148 Receptor kinase-like Gene Family AT3G58690 46.405 1.44e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Ahy12g1383 PK_Tyr_Ser-Thr 2.60E-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1383 - - aip:107627279 472.241