Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1375 ATGGGGAACACTTGTGTTGGTCCTAGCATTAAAAATGGGTTTCTTCAGTCGGTTTCTGCGGCAATGTGGAGGTCGCAATCGCCAGATGAATTGGCATCCAATCGAGAAAGTGTAAAGGAGGAAGCAACCAATGAACCTGAATCTGGGTTGCCTGTCCAGAACAAACCTCCTGAGCAGTTAACTATGCCAAAACATGAGGCAAAAGAAAAATCAAAACCAGAATCAAAGTCAAAAGTGGAAACGGAACCGGAACAGGAGAAGAGTAAACACAGGAAACCAGCTTCTGTGAAGAGAGTTTCGAGTGCAGGGCTTCGTGTTGATTCTGTTTTACAAAGAGAGACTGGTAATTTCAAGGATTTCTTCAGTTTGGGAAGAAAACTTGGACAGGGACAGTTTGGGACAACATTTTTATGTGTTGAGAAGGCAACAGGACAAGAATTTGCCTGTAAATCCATTGCAAAGAGGAAGCTGGTAACTGACGAGGATGTCGAGGATGTGAGGAGAGAAATTCAGATAATGCACCACTTGTCTGGCCATCCAAATGTTATTTCCATTAAAGGTGCTTATGAGGATGCGATAGCGGTTTATGTTGTGATGGAATTATGTGCAGGTGGTGAGCTTTTCGATAGGATTATTCAGCGTGGACATTACACTGAAAGAAAGGCTGCCGATCTTATACGGACCATAGTTGGGGTTGTGGAAGCTTGTCATTCTCTTGGTGTGATGCATAGAGACCTTAAACCTGAGAATTTTCTTTTTGTGAATCAGCATGAGGATGCACTTCTCAAAACCATTGACTTTGGATTATCCGTGTTCTTTAAGCCAGGTGATATATTCAATGATGTGGTTGGCAGCCCATATTATGTTGCCCCAGAAGTTCTGCGAAAGAGGTACGGTCCTGAAGCAGATGTTTGGAGTGCTGGAGTTATCCTGTATATTCTTTTGAGTGGAGTTCCTCCATTTTGGGCAGAAAATGAACAAGGAATATTTGAACAGGTTCTGCGTGGTGATCTTGATTTCTCGTCAGATCCCTGGCCTGCAATTTCGGAAAGTGCTAAAGATTTAGTAAGGAAAATGCTTGTTCGGGATCCTAGAAGGCGGATGACTGCCCATCAAGTACTATGTCATCCATGGATTCAAGTTGATGGTGTTGCTCCAGACAAGCCACTTGATTCTGCTGTACTAAGTCGCCTGAAACAATTTTCTGCTATGAATAAACTTAAGAAAATGGCTCTTATAGTTATTGCAGAGAGCTTATCTGAAGAAGTAGCTGGCTTAAAGGAAATGTTCAAGATGATAGATACAGACAACAGTGGTCAAATAACTTTCGAAGAACTTAAAGCTGGCTTGAAAAGATTTGATGCTAATCTTAAGGAATCTGAGATCTATGATTTAATGCAAGCAGCTGATATAGATAACAGTGGAACAATTGATTATGGCGAGTTCATTGCTGCAACCTTGCATCTTAATAAGATTGAAAGAGAAGATCATTTATTTGCAGCCTTTACATACTTTGATAAAGATGGAAGTGGTTATATTACCCAAGATGAACTTCAACAGGCTTGTGATGAGTTTGGCATTGAAGATGCCCGCTTGGAAGAGATAATCAAAGAAATCGATCAAGATAATGATGGGCGCATAGATTATAATGAGTTTGTGGCCATGATGCAGAATGGAAGCCTTCCCATGGTTGGTAGAAAGGGCGTAGAACATAGCTTCAGCATTGGTTTCAGGGAGACATTAAAACTATAA 1752 0.4115 MGNTCVGPSIKNGFLQSVSAAMWRSQSPDELASNRESVKEEATNEPESGLPVQNKPPEQLTMPKHEAKEKSKPESKSKVETEPEQEKSKHRKPASVKRVSSAGLRVDSVLQRETGNFKDFFSLGRKLGQGQFGTTFLCVEKATGQEFACKSIAKRKLVTDEDVEDVRREIQIMHHLSGHPNVISIKGAYEDAIAVYVVMELCAGGELFDRIIQRGHYTERKAADLIRTIVGVVEACHSLGVMHRDLKPENFLFVNQHEDALLKTIDFGLSVFFKPGDIFNDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLSGVPPFWAENEQGIFEQVLRGDLDFSSDPWPAISESAKDLVRKMLVRDPRRRMTAHQVLCHPWIQVDGVAPDKPLDSAVLSRLKQFSAMNKLKKMALIVIAESLSEEVAGLKEMFKMIDTDNSGQITFEELKAGLKRFDANLKESEIYDLMQAADIDNSGTIDYGEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITQDELQQACDEFGIEDARLEEIIKEIDQDNDGRIDYNEFVAMMQNGSLPMVGRKGVEHSFSIGFRETLKL* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1375 583 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 66 567 - -
Ahy12g1375 583 Gene3D Transferase(Phosphotransferase) domain 1 207 384 - -
Ahy12g1375 583 Pfam EF-hand domain pair 426 486 IPR002048 GO:0005509
Ahy12g1375 583 Pfam EF-hand domain pair 496 557 IPR002048 GO:0005509
Ahy12g1375 583 SUPERFAMILY Protein kinase-like (PK-like) 119 380 IPR011009 -
Ahy12g1375 583 MobiDBLite consensus disorder prediction 22 99 - -
Ahy12g1375 583 SMART serkin_6 121 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1375 583 ProSitePatterns Protein kinases ATP-binding region signature. 127 154 IPR017441 GO:0005524
Ahy12g1375 583 Gene3D Phosphorylase Kinase; domain 1 123 206 - -
Ahy12g1375 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Ahy12g1375 583 PANTHER SERINE/THREONINE-PROTEIN KINASE 66 567 - -
Ahy12g1375 583 Gene3D - 405 556 - -
Ahy12g1375 583 CDD EFh 497 557 IPR002048 GO:0005509
Ahy12g1375 583 Pfam Protein kinase domain 122 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1375 583 MobiDBLite consensus disorder prediction 61 91 - -
Ahy12g1375 583 Gene3D - 395 487 - -
Ahy12g1375 583 ProSiteProfiles Protein kinase domain profile. 121 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1375 583 ProSiteProfiles EF-hand calcium-binding domain profile. 527 562 IPR002048 GO:0005509
Ahy12g1375 583 ProSiteProfiles EF-hand calcium-binding domain profile. 421 456 IPR002048 GO:0005509
Ahy12g1375 583 CDD STKc_CAMK 120 378 - -
Ahy12g1375 583 ProSitePatterns EF-hand calcium-binding domain. 434 446 IPR018247 -
Ahy12g1375 583 SUPERFAMILY EF-hand 421 557 IPR011992 -
Ahy12g1375 583 ProSitePatterns EF-hand calcium-binding domain. 470 482 IPR018247 -
Ahy12g1375 583 ProSiteProfiles EF-hand calcium-binding domain profile. 457 492 IPR002048 GO:0005509
Ahy12g1375 583 SMART efh_1 531 559 IPR002048 GO:0005509
Ahy12g1375 583 SMART efh_1 497 525 IPR002048 GO:0005509
Ahy12g1375 583 SMART efh_1 461 489 IPR002048 GO:0005509
Ahy12g1375 583 SMART efh_1 425 453 IPR002048 GO:0005509
Ahy12g1375 583 ProSitePatterns EF-hand calcium-binding domain. 540 552 IPR018247 -
Ahy12g1375 583 CDD EFh 426 485 IPR002048 GO:0005509
Ahy12g1375 583 ProSiteProfiles EF-hand calcium-binding domain profile. 493 526 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1375 Ahy-Chr12 62486044 62493871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1375 1 578 EF-hand Containing Proteins AT5G04870 76.961 0.0 947
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Ahy12g1375 Pkinase 3.10E-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1375 K13412 - gmx:100797449 1027.31