Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1360 ATGCTATTCAGGGGCTTTCAGAGAAGAGAAGCAGTTAGGGTTTTCATCCAACTGCAATCCCTGCCATTCTCATCCCCTTTCTCTGCTGCAAATTTCTGCGACCTGCTTCCGCCGACGCGCCACGCCTCCGCCGCCGCGGCGCCCTGCTTCCGCCTCGCCCTGCTTCCGCCACCGCGCCATGCCTCCCCACGCCTCCCACGCTCAATAAGACAAGAGGTTTCTGCGGCCCTAAATCGCTCAACTGGTTCATCAGGAACACGTGACCATGATTCACCAGATGATAAATCCAAATGGGAATGCGTGAGGAAAGGGGTTTGCTGCATTTGCTGCGAAAGCAATATTGATTCTCTCTTGTACAGATGTGGGCACATGTGCACATGTTCTAACTGTGCTAATGATTTGCACCGAAGTGGAAGGAAGTGTCCAATGTGTCAAGCACCAGTTGTTGAAGTAATTCGTGCTTATTCCATACTATAG 477 0.5178 MLFRGFQRREAVRVFIQLQSLPFSSPFSAANFCDLLPPTRHASAAAAPCFRLALLPPPRHASPRLPRSIRQEVSAALNRSTGSSGTRDHDSPDDKSKWECVRKGVCCICCESNIDSLLYRCGHMCTCSNCANDLHRSGRKCPMCQAPVVEVIRAYSIL* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1360 158 MobiDBLite consensus disorder prediction 76 97 - -
Ahy12g1360 158 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 156 IPR013083 -
Ahy12g1360 158 PANTHER PROTEIN, PUTATIVE-RELATED 65 157 - -
Ahy12g1360 158 Pfam Zinc finger, C3HC4 type (RING finger) 104 150 - -
Ahy12g1360 158 ProSiteProfiles Zinc finger RING-type profile. 106 145 IPR001841 -
Ahy12g1360 158 SUPERFAMILY RING/U-box 105 151 - -
Ahy12g1360 158 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 65 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1360 Ahy-Chr12 59878586 59880134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1360 106 153 C3H Transcription Factor Family AT3G06140 37.500 8.62e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1360 - - ahf:112730063 334.724