Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1358 ATGGCGAACAAACTGAGCGCTGTTATTATCATGGGGTTTGCCATCTTTAGCCTTGTTTCGGTGACATCCGCTTTTTCGGGAACAGCAACTTACTATACAGTTTACACTCCATCCGCATGCTACGGGTACGAGGACGAAGGAACGATGATTGCAGCTGCAAGCGAGGGAATATACAACAATGGAGGTGCATGTGGCAAAATGTATAAGATCACATGCACAGGTGCGACCAACGCCGGCGTCACTCAACCGTGCACCGGCGCCAGTGTTACCGTCAAGGTTGTCGATCTTTGTCCCTCTCCAGGCTGCCAGGGAACATTTGATCTCTCTCAAGAAGCTTTCTCTCAGATAGCTAACACCAATGCTGGAAAAGTTTATATTGACTATACCCCGGTTTGA 396 0.4848 MANKLSAVIIMGFAIFSLVSVTSAFSGTATYYTVYTPSACYGYEDEGTMIAAASEGIYNNGGACGKMYKITCTGATNAGVTQPCTGASVTVKVVDLCPSPGCQGTFDLSQEAFSQIANTNAGKVYIDYTPV* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1358 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 26 131 IPR007112 -
Ahy12g1358 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN ISOFORM X2 4 130 - -
Ahy12g1358 131 Gene3D - 23 131 IPR036908 -
Ahy12g1358 131 Pfam Lytic transglycolase 51 128 IPR009009 -
Ahy12g1358 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 130 IPR044206 GO:0009627|GO:0048046
Ahy12g1358 131 SMART dpbb_1 50 128 IPR007112 -
Ahy12g1358 131 SUPERFAMILY Barwin-like endoglucanases 14 131 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1358 Ahy-Chr12 59832181 59842995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1358 47 131 Expansin Gene Family AT2G40610 32.990 9.81e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1358 - - ahf:112743758 251.906