Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1356 ATGCGAAAAGCGATTGTTATTGAAGATTTTGTTTGGGAGAAGTATCAGAAGAAAGCTTCATTTAATTCAAACCAAGCATCTTCAAAGGCTTTGGAAGTCCCAAAAGGCTATCTTGCTGTCTATGTTGGAGAGAATATGAAGCGGTTCGTGATTCCCATTTCGTATTTGAACCAGACATCATTTCAAGAATTACTAAGCCAAGCAGAAGAAGAATTCGGATATGATCATCCAATGGGTGGTCTCACTATTCCATGCAGTGAGGAAACCTTCTTGGACCTCACTTCTTGCTTCAACTGA 297 0.3973 MRKAIVIEDFVWEKYQKKASFNSNQASSKALEVPKGYLAVYVGENMKRFVIPISYLNQTSFQELLSQAEEEFGYDHPMGGLTIPCSEETFLDLTSCFN* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1356 98 Pfam Auxin responsive protein 16 95 IPR003676 GO:0009733
Ahy12g1356 98 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 16 97 IPR003676 GO:0009733
Ahy12g1356 98 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 16 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1356 Ahy-Chr12 59643954 59645121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1356 25 97 Calmodulin-binding Proteins AT3G43120 52.055 6.90e-22 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1356 - K14488 aip:110269930 159.458