Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1339 ATGGAAGGTCTAGCACTAGGAGAAGACCCACTTAGCGACTTCGATTGTGACGCCTTTCTTGAACAATTACTAGATCCTCACGTTGACGATATCTTCCATGAGAAGGAGGTTCCTTCTGCCGTAGCAGGTGGCGGTGTTTTATCAGAGATCGAGAACTTGTTGATGGCCGATGATGAAGACGACGGCGCTGTCATTCCCGCTACTCCGTCGTTGGAATCTGACTACGACAAGCTTCTTGCTGAAATACTCGTCGAGCCGCACGGTGACTCCGACGACGGTTCCACTCCTTCTATCGAAGATCCCGATAAGGTCAGGGCTGATGCAGCGGGCCCCAAGGAGGTTGGCATTGAACCCGTTTCGAAGAAGCTATTAAGGAAAATGAGGAACAGAGATGCTGCTGCGAGATCAAGAGAGAGGAAGACGAAGTATGTAAAGGACCTTGAGATGAAAAGTAGGTATTATGAAGGGGAATGCCGTAGACTGGGGCATTTGCTCCAGTGCTGCTATGCTGAGAACCATGCTTTGCGTCTTTGCTTACAGGCACGAGGTGCATTGAATGCTTCCATGACCAAGCAGGAGTCTGCTGTGCTCTTGTTGGAATCCCTGCTGTTGGGTTCCCTGCTGTTGTTCATGGGTGTCATGTGCCAATTCAGTCTACGACTGACAGCCTGGTTAACGGTACTACTTCCAAGAGAAAACAAGGAGCAGAGAAACGCAAGAAGGGTAGCTCGAAAAGGACCCGAAAGTGATATATCTGAGTGTTTCCGGGTGCAATCCTCTACAAAGAGTAGAAGTTGTCGGGCTTCAAGGAGAAAGATGAAATTCTTTATTTCTTCTATATTGTGCAGATGGAGTGATTACTATAATAAAAAAACTGAAAGAATTGTTTAA 891 0.4725 MEGLALGEDPLSDFDCDAFLEQLLDPHVDDIFHEKEVPSAVAGGGVLSEIENLLMADDEDDGAVIPATPSLESDYDKLLAEILVEPHGDSDDGSTPSIEDPDKVRADAAGPKEVGIEPVSKKLLRKMRNRDAAARSRERKTKYVKDLEMKSRYYEGECRRLGHLLQCCYAENHALRLCLQARGALNASMTKQESAVLLLESLLLGSLLLFMGVMCQFSLRLTAWLTVLLPRENKEQRNARRVARKGPESDISECFRVQSSTKSRSCRASRRKMKFFISSILCRWSDYYNKKTERIV* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1339 296 CDD bZIP_HY5-like 122 173 - -
Ahy12g1339 296 PANTHER BZIP TRANSCRIPTION FACTOR 60 14 278 - -
Ahy12g1339 296 Pfam bZIP transcription factor 120 160 IPR004827 GO:0003700|GO:0006355
Ahy12g1339 296 SUPERFAMILY Leucine zipper domain 121 177 IPR046347 GO:0003700|GO:0006355
Ahy12g1339 296 MobiDBLite consensus disorder prediction 86 110 - -
Ahy12g1339 296 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 125 139 IPR004827 GO:0003700|GO:0006355
Ahy12g1339 296 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 119 161 IPR004827 GO:0003700|GO:0006355
Ahy12g1339 296 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 14 278 - -
Ahy12g1339 296 Gene3D - 120 181 - -
Ahy12g1339 296 SMART brlzneu 117 181 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1339 Ahy-Chr12 57944228 57947044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1339 134 277 bZIP Transcription Factor Family AT1G42990 45.578 7.54e-17 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy12g1339 bZIP_1 5.10E-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1339 - - ahf:112743660 537.339