Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1338 ATGGGAAAGTCCGACGAAGAGCACCACCAACCTTTGCCTCCCGGCGCCGCCGCCGCGGAAGATCCGAGGCCCAATGTGGCTGTCGGCGGTTCCTTTTCTTTTAGTCTCAGATGCCTTCTCGTCTTGCTCTTCTCCGCCGCCGTGTTCCTGTCGGCTCTATTCTTCTTGCCACCGTTCGCTAACTTCTCAGATCAGAAGGATCCACTTTCCCATTCACAGTATAAAGGGCATGATATTGTTGCAAGATTTTTCCTTGAGAAGCCAGCTTCTTTGTTAGAAGAAAACACCGTGCAGCTTGCAAATGACATTTTTGAAGAGATTGGAGTTCCCTCTACCAAAGTGGTCATCTTGTCTCTAGATTCCTTCCCAGGATCAAACACAACAAAAGTGGTATTTGCAGTTGATCCTGATCGTAAATATTCTGAAATGTCCTCAGCTACCCTCAGTTTGATTAGGGCATTATTTAAATCTTTGGTTATCCGCCAATCGTTCCTCCAACTTACTCCATCCTTGTTTGGAAAACCCTCCTTTTTTGAGGTGCTAAAATTTAAGGGAGGAATCACTATAATTCCGGAACAGAAGGTGTTTCCTCTGCAGCACGTGCAACCTCTATTCAACTTTACTTTATATTTCTCTATTTATCAAATACAATCTAGTTTTGATAGGCTGACAAGTCAGCTAAAGTCTGGATTACATTTGGCATCTGATGAGAATGTGTATGTCGTCTTATCAAATTCTGAAGGTTCAACAATAGCTGCTCCTACAATTGTTCAGGCGTCTGTCTTACTTGAATATGGGATTACTCCATCAAAGGAGAGACTAAAGCAACTAGCACAAACCATTACCGGACCCCGTTCAGATAACCTCGGCTTGAATAACACTCAATTTGGCAGGGTTAAGCAGGTCCAACTTTCCTCCATCTTGCAACATTCTCTTAATGGCAGTAGGGGTAGTGGCTCTATCCAGTCGCCCTCTTCTGCTCCTGGTCCTATGCCTCATACACACCACCACCATCATCGCCACCACCATCACCATCAGCTTCATAATGATCACCTCAGTGCTCATCTATCCCCTGCAAGTTCACCTACACCTGCACCTGCACCTGCACCTGCATCTGCATCTACAGAAGGTGCAACTCCACCTGAAGTTGGTTCTCCTGCTGCAAGTGTGCCTGCAATAGGTAGAAGCTATCATGCTCAGCCTCCTAGTTGTCAACCTGTGTATAAGAAGAGGTCTACTCGGAAAGCTTTGAAACATAGTCATGTAACTCCTGCAGTTGCTCATACTGCTTCTCTGCACTATCCTGTTGAATCACCAAAACAACGGGTTGAATCCCCAGCATACATCTCTCATTCAATTCCTGCTGAGAGTCCTTTACCAAATGTAGCTTTTGCACATGCTGAGTCACCTGCACCTAAGAATGAACCAGCTGCAGCTCATTCCGACACATATTCAACTGGGCCATCACCATCTTCATCTTCTGCAGGCTATCTTGGGACTGTTAATTGGGCATCCGTAATGTTTGTACTACTTGTATTACATGTATAA 1548 0.4516 MGKSDEEHHQPLPPGAAAAEDPRPNVAVGGSFSFSLRCLLVLLFSAAVFLSALFFLPPFANFSDQKDPLSHSQYKGHDIVARFFLEKPASLLEENTVQLANDIFEEIGVPSTKVVILSLDSFPGSNTTKVVFAVDPDRKYSEMSSATLSLIRALFKSLVIRQSFLQLTPSLFGKPSFFEVLKFKGGITIIPEQKVFPLQHVQPLFNFTLYFSIYQIQSSFDRLTSQLKSGLHLASDENVYVVLSNSEGSTIAAPTIVQASVLLEYGITPSKERLKQLAQTITGPRSDNLGLNNTQFGRVKQVQLSSILQHSLNGSRGSGSIQSPSSAPGPMPHTHHHHHRHHHHHQLHNDHLSAHLSPASSPTPAPAPAPASASTEGATPPEVGSPAASVPAIGRSYHAQPPSCQPVYKKRSTRKALKHSHVTPAVAHTASLHYPVESPKQRVESPAYISHSIPAESPLPNVAFAHAESPAPKNEPAAAHSDTYSTGPSPSSSSAGYLGTVNWASVMFVLLVLHV* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1338 515 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 514 - -
Ahy12g1338 515 MobiDBLite consensus disorder prediction 311 423 - -
Ahy12g1338 515 MobiDBLite consensus disorder prediction 332 349 - -
Ahy12g1338 515 MobiDBLite consensus disorder prediction 1 22 - -
Ahy12g1338 515 MobiDBLite consensus disorder prediction 468 491 - -
Ahy12g1338 515 MobiDBLite consensus disorder prediction 311 329 - -
Ahy12g1338 515 PANTHER F20B24.21 1 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1338 Ahy-Chr12 57758711 57764843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1338 1 512 C3H Transcription Factor Family AT3G10810 43.217 6.52e-94 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1338 - - gmx:100818532 533.102