Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1289 ATGCGATTTGATCTTAAAAAGGGAAGGAAGTGCTCATGTGTTCCTGGATACAAAGTAAAGAATCAAAGTGATTGGTCTTATGGGTGTGAATCCATATTTGCTGCTACATCTAATGAAAGGAAGGTAACTTTCTTGGAACTGGGCCAAGTTGAGTTCTATGGCTATGACGCTTATTACTTGCCAAATTTTACCTACACTCATTGTGAAAGTTTGTGCTTGAATAATTCTAATTGCAAAGGATTTCAATATTCATACGACAACGGTGCGAGCCTGTTCAAGTGCTATACAAAAACACAATTGCTCAATAGACATTTTCCAGGAGCCGCAGGAACTATAACCTACTTGAAAGTGCCCAAAGGGAAGAGCTTTCCCACCAGCTATGAAGACTCTGTCATCAGAAACAGTGATTGTTCTGTGAAAATTCATAGAGAGTATTCAAAAAAGCATGTAAGCCATTTTGTGAGCTTCCTTTTGTGGTTTGCCACTGCAATTGGAGTTCTTGAAATGGCTTGTGTCTTTGTTGTTTTGTTCTTAATCAAGAGCAAGCAGAATTCTAGCATAGATCCACATGGCCATCATCTTGCAACAGTGGGATTTAGAAAATTTAGCTATTCTGAGCTAAAAAAGGCGACAAAAGAATTCAGCCAAGAGATTAGAAGGGGTGCAGGAGGCATTGTATACAAAGCTATTTTGTCTAATCAAAGAATTGCTGCTATAAAGAAACTCAATAATGCTATGCAAGGAGAAGGTGAATTCCTTGCTGAAGTGAGCATCATTGGAAGGCTCAACCACATGAACTTGATTGAAATGTGGGGTTATTGTGCTGAGGGAAAGCATCGGCTATTGGTGTATGAGTACATGGAAAATGGTTCTTTGGCAGATAACCTCTCATCCAATACACTCGATCAGAGCAAGAGGTATAACATCGCTCTCAAAACAGCAAGAGGTTTGGAATATTTACATGAAGAATGCTTGGAACGGATTTTGCATTGTGATATAAAACCTCAAAATATTCTCCTGGATTCAAATTATCAACCCAAGGTTGCAGATTTTGGATTGTCCAAGTTATTGAACAGGGATGTTCTCAATAACGATCGCAATTTCTCAATGATAAGAGAAACTAGAGGGTATATGGCGCCTGAGTGGGTTTTCAAACTAGCAATTATTAGAGCCAAAGGTGAAGAACCTGGAATCAAAGGCAAATCGACCAATATGGGATACAAAATCATGGACAAGACCATGTTCTTGTTGAACACTCGCCGATTGAAACATGGTTTTTGTTCCGTGTTACTCTGCCGAGCGTTGAGGCAAAGTCTTGCGCGAAGGCGGCAGAAGCAGGTTGCGCGGTGGCAGAAGCAGGGAGCGGCGGCGGAAGTAGGGCGCGGTGGCGGCAGCAGGTTGCAGCGGTGGCGGAGGCGTGTTGCGGCGGCGAGGATATGTGAACGAGATTTGCAGCAGAGAAAGAGGATGAGAATGGCAGGGATTGAAATTGGATGA 1497 0.4215 MRFDLKKGRKCSCVPGYKVKNQSDWSYGCESIFAATSNERKVTFLELGQVEFYGYDAYYLPNFTYTHCESLCLNNSNCKGFQYSYDNGASLFKCYTKTQLLNRHFPGAAGTITYLKVPKGKSFPTSYEDSVIRNSDCSVKIHREYSKKHVSHFVSFLLWFATAIGVLEMACVFVVLFLIKSKQNSSIDPHGHHLATVGFRKFSYSELKKATKEFSQEIRRGAGGIVYKAILSNQRIAAIKKLNNAMQGEGEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLADNLSSNTLDQSKRYNIALKTARGLEYLHEECLERILHCDIKPQNILLDSNYQPKVADFGLSKLLNRDVLNNDRNFSMIRETRGYMAPEWVFKLAIIRAKGEEPGIKGKSTNMGYKIMDKTMFLLNTRRLKHGFCSVLLCRALRQSLARRRQKQVARWQKQGAAAEVGRGGGSRLQRWRRRVAAARICERDLQQRKRMRMAGIEIG* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1289 498 Gene3D Hepatocyte Growth Factor 46 112 - -
Ahy12g1289 498 ProSiteProfiles PAN/Apple domain profile. 29 118 IPR003609 -
Ahy12g1289 498 Gene3D Transferase(Phosphotransferase) domain 1 287 395 - -
Ahy12g1289 498 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 3 389 - -
Ahy12g1289 498 SMART serkin_6 212 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1289 498 Pfam Protein kinase domain 215 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1289 498 SUPERFAMILY Protein kinase-like (PK-like) 187 386 IPR011009 -
Ahy12g1289 498 CDD PAN_AP_plant 37 118 - -
Ahy12g1289 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672|GO:0006468
Ahy12g1289 498 Gene3D Phosphorylase Kinase; domain 1 178 286 - -
Ahy12g1289 498 ProSiteProfiles Protein kinase domain profile. 212 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1289 498 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1289 Ahy-Chr12 45524905 45527114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1289 195 386 Receptor kinase-like Gene Family AT1G66980 42.424 8.24e-45 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ahy12g1289 Pkinase 4.80E-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1289 - - ahf:114924904 997.653