Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1287 ATGGCAACCGAAACAGCAGGAGCAGTAGTTGAATCGTCCTCAGCAGCAACCGTGCCTTCGCCGGCGCCGGAGGCTGGATCGAAACACAAGCTCGAGAGGAAGTGGACGTTCTGGTTCGACAACCAATCGAAGCCGAAGCAAGGCGCTGCTTGGGGTACCTCTCTCCGCGAGGTTTACACTTTCGATACTGTCGAAGAGTTCTGGTGTTTGTATGATCAGGTATTCAAGCCCAGCAAATTGCCTGGAAATGCAGACTTCCACTTGTTCAAGACTGGGATTGAGCCGAAATGGGAAGATCCTGAGTGTGCTAAGGGAGGCAAGTGGACTGTCACAAGCAACAGGAAGGCTAATCTTGATAACATGTGGCTTATGATGGCTTTGATTGGGGAGCAATTTGACGATGCTGAGGACATATGCGGTGTGGTTGCAAGTGTGCGCCAGAGGCAGGACAAACTTTCGCTATGGACAAAGACCGCAGCAAACGAGGCAGCTCAGATGGGCATTGGAAGGAAGTGGAAGGAGATCATTGATGTTACTGACAAGATAATATATAACTTCCATGATGATTCTAGAACCCGATCATCAAAGAGTCGGTACAGTGTATAA 606 0.4934 MATETAGAVVESSSAATVPSPAPEAGSKHKLERKWTFWFDNQSKPKQGAAWGTSLREVYTFDTVEEFWCLYDQVFKPSKLPGNADFHLFKTGIEPKWEDPECAKGGKWTVTSNRKANLDNMWLMMALIGEQFDDAEDICGVVASVRQRQDKLSLWTKTAANEAAQMGIGRKWKEIIDVTDKIIYNFHDDSRTRSSKSRYSV* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1287 201 SUPERFAMILY eIF4e-like 12 196 IPR023398 -
Ahy12g1287 201 Pfam Eukaryotic initiation factor 4E 30 181 IPR001040 GO:0003723|GO:0003743|GO:0006413
Ahy12g1287 201 ProSitePatterns Eukaryotic initiation factor 4E signature. 85 108 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Ahy12g1287 201 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 8 192 IPR001040 GO:0003723|GO:0003743|GO:0006413
Ahy12g1287 201 MobiDBLite consensus disorder prediction 1 20 - -
Ahy12g1287 201 Gene3D RNA Cap, Translation Initiation Factor Eif4e 22 201 IPR023398 -
Ahy12g1287 201 MobiDBLite consensus disorder prediction 1 27 - -
Ahy12g1287 201 PANTHER BNAA05G12740D PROTEIN 8 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1287 Ahy-Chr12 45489823 45495730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1287 16 201 Eukaryotic Initiation Factors Gene Family AT5G35620 66.321 1.85e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1287 K03259 - pvy:116135105 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1287 12 45489823 45495730 Ahy2g1147 2 41004510 41010552 hybridization