Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1255 ATGGCTTCGCCATCTCCATCAATGGAAAGAAGGGTTGCCGGGGATGAAGATACCACTGGGGGCGTGCGCATTGCCGATGAAGCAGAAATGTCTGACAGAGCAGACCACGGAGTTGGATCGTTTGAGGGCGAAGGCTCTGTAGGGATGGAGTCGGACGAGTACGACTTTCAGGAAGATGAAACAGAACACGACCATCATGCAGAGGCCGATGTCGACAATGGGATGCGGTTGAATTGGAAGACAGTTTGGACGGCGCCGGAGGAATTGGAGTCGATAGGTTGGATTGATTTTTTGAGCTTGAGTGAGGAGGATGTTCTCCGGTTTAATTTCGCAAATGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTCCGGCGCGAGACGTTCCAGAAGCGAAAAACGCGGCGAAGTAAGGATACGTCAGGAGTTCGTGTGCCACCGACAAGGGTTCCGATCCCCAAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGATGATGAATCAGGACGTTGGCACGTTGTGTACTTTTCAAACGCGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTCCCAGGCCATCGGAAGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGTGTCTCCCGAATCCACGGTTTTATGGCGAGCCTAGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCCTAGACGCGGAATCGTGTCTAAGGTATCTCCGAGAGTGCAAGACAAATGATCCAGCACTATACTACAAGGAAGTTGTTGACGGTGAGGGCGTGTTGCAACATTTGTTTTGGTGTGACGGCACGAGCCAAATTGATTACCAGGTGTTTGGAGACGTGGTTGCATTTGATGCAACGTACAAGAAAAATGTTTACCTTTCACCTCTTGTAGTATTCTCCGGTGTGAATCACCACAACCAAACGGTTGTCTTTGCCGCTGCACTGGTGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGCTTCAACAGTTGCAAACTTCAATGAAAGGGAAGGCTCCCGTTTCCATAATAACCGACGGTGACAGGCAAATGAAGTCTGCGATTGAGCAAGTTTTTCCAGAGGCTCACCATCGACTCTGCGCTTGGCATCTACTCCGAAACGCCACTAGCAACATCGGAAAGCCCAAATTTACCAGGATGTTTAGGGATTGCATGCTTGGCGACTATGAGGTCCGAACATTCCAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCGTCGTCGATAAAAGATGGGTACAGGACATGTACGAGAGAAGGCACAGTTGGGCCACAACACACATACGGGGAAAGTTCTTTGCCGGATTTCGAACAACATCAAGGTGCGAGGGCTTGCACGCTGTGATATCACGGTATGTTAAGTCTCGATACAGCTACACTGAGTTTTTACATCATTTCCATCGATGCTTGATGTTCGTGCGTGCAAAGGAGGTGGAGGCTGATTTCGAGTGTGCAAAGGGTGACCCTGTTATGAGCACAAACCTGAAACAGCTGGAGCGGAGTGCAGCCGATAACTACACTCGTACAATATTCTATTTGTTTGTTCCCATTCTTGATAGGGCCTGTGCAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATCCACACCGTCTCTCGATATGGCACTCCGGGAAAGGATTGGCGTGTTGTTGCAACGTCTGATATGAGGGAGGCCCGATGCACGTGCATAAGAATAGAATGTTTCGGAGTCACCTGCGAACATATAATTGCGGTGCTTGTTCTTAACAATGTTCATGAGATCCCGAGGTCTCTGATATTGTCGAGAAGGACCAAGGATACAAAACTTGTGGCGGTGCAGTCGATGGGCGTGATTTGGGATTCTGTACAACTGACGCAACACTGGTGCCTGATGGATTGGTACCGGAAAGTGTGCAAGATTGCATGTCACAGCACTGAAAAGTTCCAGTTTGCAAGAGACATTGCCATGCTGATGCTAAATCACTTCGAGAACGAAGATGCAGGGGACACCAGTTTTCCACCCGAGGGGCCACCTACTGAGGGTGGCAGAGGCCTGGCGCGAAATCCACCCAGGCGCAATACAAAGGGTAACGGTGCTCATGGTGGAAAAAAAACCCAGCGATGTCGTTTGTGCCGGGAGGTGGGACACAACAGGACGACGTGTCCGGACCGCCGCACAATGGAGTCATCTGGCACAGTTGCAGATGACATGGATTTGATGGACATTGACAAGCTCTATGATAACCTATCTGGCGATCTGTATGCGACCGCGGAGATTCCTTCATTCCAATGCTCCGATAGTGACACGCAGGCTGGGTTTGCTAACAGCGACTTCGCTGGGACCAACACGTCCGTGCCAGTCATGTCTCTCGCCGATTGA 2529 0.5038 MASPSPSMERRVAGDEDTTGGVRIADEAEMSDRADHGVGSFEGEGSVGMESDEYDFQEDETEHDHHAEADVDNGMRLNWKTVWTAPEELESIGWIDFLSLSEEDVLRFNFANVDIAFEFYQQYAKHHGSGARRSRSEKRGEVRIRQEFVCHRQGFRSPKFYSMPNRQKRPRAETRCGCPARMLLRMDDESGRWHVVYFSNAHNHHVLELRFSSMLPGHRKMSEADIEQMNDMRKGGIGVSRIHGFMASLAGGYHNVPYTTRDMHNVNAKQRREGGLDAESCLRYLRECKTNDPALYYKEVVDGEGVLQHLFWCDGTSQIDYQVFGDVVAFDATYKKNVYLSPLVVFSGVNHHNQTVVFAAALVADEKEETYVWLLQQLQTSMKGKAPVSIITDGDRQMKSAIEQVFPEAHHRLCAWHLLRNATSNIGKPKFTRMFRDCMLGDYEVRTFQRKWFEMVEKFGVVDKRWVQDMYERRHSWATTHIRGKFFAGFRTTSRCEGLHAVISRYVKSRYSYTEFLHHFHRCLMFVRAKEVEADFECAKGDPVMSTNLKQLERSAADNYTRTIFYLFVPILDRACAMRVVDSEDNGSYFIHTVSRYGTPGKDWRVVATSDMREARCTCIRIECFGVTCEHIIAVLVLNNVHEIPRSLILSRRTKDTKLVAVQSMGVIWDSVQLTQHWCLMDWYRKVCKIACHSTEKFQFARDIAMLMLNHFENEDAGDTSFPPEGPPTEGGRGLARNPPRRNTKGNGAHGGKKTQRCRLCREVGHNRTTCPDRRTMESSGTVADDMDLMDIDKLYDNLSGDLYATAEIPSFQCSDSDTQAGFANSDFAGTNTSVPVMSLAD* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1255 842 ProSiteProfiles Zinc finger SWIM-type profile. 604 640 IPR007527 GO:0008270
Ahy12g1255 842 MobiDBLite consensus disorder prediction 716 755 - -
Ahy12g1255 842 MobiDBLite consensus disorder prediction 1 48 - -
Ahy12g1255 842 Pfam FAR1 DNA-binding domain 118 207 IPR004330 -
Ahy12g1255 842 MobiDBLite consensus disorder prediction 10 39 - -
Ahy12g1255 842 Pfam MULE transposase domain 327 421 IPR018289 -
Ahy12g1255 842 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 105 696 IPR031052 GO:0006355
Ahy12g1255 842 PANTHER OS02G0262500 PROTEIN 105 696 - -
Ahy12g1255 842 SUPERFAMILY Retrovirus zinc finger-like domains 743 778 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1255 Ahy-Chr12 40525483 40528281 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g1255 MULE 2.20E-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1255 - - aip:107647116 1474.53