Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1248 ATGGATGTCATCTGTAGTGACAAAACTATAACCTTGACATTGAATAAGCTTAGTGTTGATAGAAACTTGATTGAGGTATTTGCTAAGGGTGTTGAGAAGGAGTATGTTATCCTTCTTGCTGCAAGGGCCTCTAGGACCGAAAATCAGAATGCTATAGATGCTGCAATTGTTGGGAAGCTTGCTGATCCAAAGGAGATCATAACCCTTTGCAACTGCAAAGAGGATGTCGGGAAGAAGGTTCATGCAATGATTGATAAGTTCACTGAGCGTGGACTTCAGTCTTTAGGTGTTGCAAGATTCATATTATCCAAATGTATCTCAGCAAATCAACTAACTATGTTTGCAAACATAGATACTAATGTAGATACCTACAATTTTGAAGAAGCAAGTATGCAGTTATCAACTGCCAAGCTTTAG 417 0.3861 MDVICSDKTITLTLNKLSVDRNLIEVFAKGVEKEYVILLAARASRTENQNAIDAAIVGKLADPKEIITLCNCKEDVGKKVHAMIDKFTERGLQSLGVARFILSKCISANQLTMFANIDTNVDTYNFEEASMQLSTAKL* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1248 138 Gene3D - 2 16 IPR023214 -
Ahy12g1248 138 PANTHER PLASMA MEMBRANE ATPASE 1 65 - -
Ahy12g1248 138 Gene3D - 64 117 IPR023299 GO:0000166
Ahy12g1248 138 Gene3D - 17 63 IPR023299 GO:0000166
Ahy12g1248 138 PANTHER CALCIUM-TRANSPORTING ATPASE 65 100 - -
Ahy12g1248 138 PANTHER CALCIUM-TRANSPORTING ATPASE 1 65 - -
Ahy12g1248 138 PANTHER PLASMA MEMBRANE ATPASE 65 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1248 Ahy-Chr12 39683800 39685038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1248 1 99 Primary Pumps ATPases AT2G24520 55.714 1.21e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1248 K01535 - ahf:112729985 268.47