Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1241 ATGGAGTCCCATTTTGGTGAACCAGTTTCTCATTCTCTAGCATCCTTCACTAACGGCAATACCATCCATTCAAGTGACAATCTTCTCAATTCTTCCAACGTTGAAGGTGAAAAGTCTAACAAGGCAATAGATTGTACGAACATTAATGAGTTTGGAAGTGATGACACGGATCTTGTTGATGAGTTACTAGATCACAGTTGTCTTGCCGAAGATGAAATACCAAGAGTTGGGATGCGGTTTAATCATTTGAAGCTGGCTCAGGATTTTTATGCGACCTATGCAAAGAAAGTAGGTTTCATAAGCAAGATAAGGAATACAAATTATGACAGGATGACTAAGGAACTAATTAACCAATCTATTCATTGTAATCGGGAGGGTTTCCGTGGATCTCGTGTCAAAGCACCCACACGAAAGAACACGGTCGCAGCTGTCGGGTGTAGAGCAAGGGTATATGCAAAGTTTGACAAGGTGAAGCAAGATTGGGTTTTGCTAAAGGTTGAGTTGAGGCACTCGCACCCATGTTCAACTAAAAAGGCGGTGCATTACCACGAGATTAGAGAGTTGACCATGCATGCGAAATGCATGATTGAGGTTAATGATGAGGCGGACATTTGA 615 0.4195 MESHFGEPVSHSLASFTNGNTIHSSDNLLNSSNVEGEKSNKAIDCTNINEFGSDDTDLVDELLDHSCLAEDEIPRVGMRFNHLKLAQDFYATYAKKVGFISKIRNTNYDRMTKELINQSIHCNREGFRGSRVKAPTRKNTVAAVGCRARVYAKFDKVKQDWVLLKVELRHSHPCSTKKAVHYHEIRELTMHAKCMIEVNDEADI* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1241 204 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 190 - -
Ahy12g1241 204 Pfam FAR1 DNA-binding domain 88 175 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1241 Ahy-Chr12 39172510 39173950 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g1241 FAR1 5.40E-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1241 - - ahf:112729978 419.853