Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1239 ATGGAAGAAGAGAGCGAATCGGTAAGAGTAAAGGACATCATTCTGAAGCGGAAGATCGGAAATGGGTCGTTCTCGGCGGTGTGGAGGGCGGAGCACAGAGGCACCGGCGAAGAGGTGGCAGTGAAACAGGTCTTCCTCTCCAAACTCAACCTTCGCCTTAAGTCATTGTTCCACTGCGAGCTCAATTTCTTGTCCTCCGTCAACCACCCCAACATCGTTCGCCTCCTTGATTTCTTCCAGCTCAACTCAAGAATGGCATATACTGAACCTTACTTGAATCATAAGCTGTGCCCTCTTTCCAAGATTCAGGTGCCTAAAACTATGACGATCATTTTGGAATTTCGACCAGCCCAAATGGAAAGTTCCTTGTGTTTTTATCTGCGAGAAGTACTGTGGATTCAGGAGTGCACGATGCTACAAACTCACTACATAGAATTGATTGGCCAACCGATGGAAAACTCACTACAAACTGCATCATGTTGA 483 0.4679 MEEESESVRVKDIILKRKIGNGSFSAVWRAEHRGTGEEVAVKQVFLSKLNLRLKSLFHCELNFLSSVNHPNIVRLLDFFQLNSRMAYTEPYLNHKLCPLSKIQVPKTMTIILEFRPAQMESSLCFYLREVLWIQECTMLQTHYIELIGQPMENSLQTASC* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1239 160 Gene3D Transferase(Phosphotransferase) domain 1 1 131 - -
Ahy12g1239 160 SUPERFAMILY Protein kinase-like (PK-like) 9 99 IPR011009 -
Ahy12g1239 160 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 8 116 - -
Ahy12g1239 160 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 8 116 IPR045269 GO:0004674|GO:0006914
Ahy12g1239 160 ProSiteProfiles Protein kinase domain profile. 13 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1239 160 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Ahy12g1239 160 Pfam Protein kinase domain 16 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1239 Ahy-Chr12 39166046 39167496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1239 9 79 Core Cell Cycle Gene Families AT1G73690 33.333 9.74e-07 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Ahy12g1239 Pkinase 2.80E-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1239 - - aip:110268814 323.939