Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1230 ATGAAGATCTTTCTTTCTTTAAGGACATTGTCCTTTCTTTGTTGCCTTCTCTTCACTGCTAGTAACTTAGCATCTGAATCACACGCTTCAGTAACTTCGCAGGAGTTCCAATACTTCTGTGATGAGCATAGTATTACCATAGACATCGAAGGCAACTACACAACCAATAGCACCTACCATACCAACCTCAACACTCTTATGTCAAATATTCTCAACAACAAAGAAATCGATTACGGTTTCTACAATGTCTCATACGGCGAGTACCCAAACAGAGTGTACGCCATTGGACTATGTAGAGGAGACATTAAGCCGGAGCAGTGCCGAACTTGCCTAAACCAATCCAGAGCCAATCTCACGGCGGTTTGTCCGAATCGAAAGGTGGCGATCGGGTGGTACAACGACGAACTATGCATGCTGCGATACTCGAATCGCAGCATATTCCACCTGATGGACAATGGACCGGCTTATTACAAGAAAAGCGACAAAAACGCCACGGATTTGAATGAGTTCAATACAAAATTGAACGATTTGTTGAATGGCTTGAAAAGCAAAGCTTCTTCTGGTGACTCTCGGTTAAAGTATGCTGTGGGAAACTTTAGTCTTCCCAATTTTGATGATGTTTATGGTCTTGTTCAGTGCACGCCTGATTTGTCTGGAGAAGATTGTGATAACTGCATAGCTCAATCTATTGAAAGAATATCAAAAGATTGTTGTAAGGATAGCATGGGTGGTAGGGTTGTTAGGCCAAGTTGTTTTATGAGATTTGAGACATCGTATCAATTCTATGGGCCAACGGCGTATACGCCACCTTCGCCACCAGCTCCGCAGCCCACCACCACCTCTGTAACTAACCCGTCTTCAGGAGAGGATGATAACACTGAAGATATGGAAATTGTTGAGTCATTACAATTTAACTTGGAGAGTATACGAGACGCTACAAATGACTTTTCTGATGCTAATAAGCTTGGACAAGGTGGATTTGGGGCTGTTTACAAGGGTATTCTCACTAATGGACAAGAGATTGCTGTAAAAAGGTTGGCAAGGAGTTCTGGTCAAGGAGACCTAGAATTTAAGAATGAAGTGTTGTTACTGGCTAAGCTTCAACATCGAAATTTAGTTAGCCTACTTGGTTTTTGTTTGGAAGGAAGAGAAAGGCTACTCGTCTATGAATTTGTACCCAATAAAAGTCTTGATTACTTTATATTTGGTAGGTTTAAATACCTCTATTTTTTTCATTTTGGTTTCAAATTAAGTTTAATATGTGTAGATCCCACCAAGAGAGCAAATTTGGATTGGGAAAGCTGCCACAGAATCATTGGAGGTATTGCTCGAGGTCTTGTCTACCTTCATGAAGATTCTCGATTGCGTATTATTCATCGTGACCTCAAAGCAGCAAATATTCTTTTAGATGAAAAGATGAATCCTAAGATATCAGATTTTGGTACTGCAAAACTATTTGTTACAAGTCAAACTCACTCTAATACAAATAGAATTGTTGGAACTTATGGATATATGGCACCTGAATATCAATTTTATGGACTATTTTCAATCAAGTCGGATGTGTATAGTTTTGGTGTATTAGTTCTTGAGATTGTAAGTGGCAAGAAAAGCAGTGGCAATTGTCAGAGTGAGAATCCAGAGACTCTCATGAACTTTGCATGGAGAAATTGGAAGGATGGGACAATTTCAAACATTGTAGATACCACATTAAGAAATGGTTCACAGAATGAAATAATTCGATGCATCCACATTGCTTTACTATGTGTTCAAGCAAATGAAGCTCATAGACCAACCATGGCTACAGTTTTACTCATGCTTAATAATCATTCGGTCACACTCGCAGTACCTTCAGAACCTGCATTTTTGCTGAATACAGGATCAAACACATCGACAAAAAGACCAGCACAAGAATCAGTCAATGAAGCTTCAATTACTGATCCATATCCTCGCTAG 1953 0.3968 MKIFLSLRTLSFLCCLLFTASNLASESHASVTSQEFQYFCDEHSITIDIEGNYTTNSTYHTNLNTLMSNILNNKEIDYGFYNVSYGEYPNRVYAIGLCRGDIKPEQCRTCLNQSRANLTAVCPNRKVAIGWYNDELCMLRYSNRSIFHLMDNGPAYYKKSDKNATDLNEFNTKLNDLLNGLKSKASSGDSRLKYAVGNFSLPNFDDVYGLVQCTPDLSGEDCDNCIAQSIERISKDCCKDSMGGRVVRPSCFMRFETSYQFYGPTAYTPPSPPAPQPTTTSVTNPSSGEDDNTEDMEIVESLQFNLESIRDATNDFSDANKLGQGGFGAVYKGILTNGQEIAVKRLARSSGQGDLEFKNEVLLLAKLQHRNLVSLLGFCLEGRERLLVYEFVPNKSLDYFIFGRFKYLYFFHFGFKLSLICVDPTKRANLDWESCHRIIGGIARGLVYLHEDSRLRIIHRDLKAANILLDEKMNPKISDFGTAKLFVTSQTHSNTNRIVGTYGYMAPEYQFYGLFSIKSDVYSFGVLVLEIVSGKKSSGNCQSENPETLMNFAWRNWKDGTISNIVDTTLRNGSQNEIIRCIHIALLCVQANEAHRPTMATVLLMLNNHSVTLAVPSEPAFLLNTGSNTSTKRPAQESVNEASITDPYPR* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1230 650 Pfam Salt stress response/antifungal 51 143 IPR002902 -
Ahy12g1230 650 Pfam Salt stress response/antifungal 160 257 IPR002902 -
Ahy12g1230 650 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 286 406 - -
Ahy12g1230 650 ProSiteProfiles Gnk2-homologous domain profile. 152 260 IPR002902 -
Ahy12g1230 650 Gene3D Transferase(Phosphotransferase) domain 1 418 615 - -
Ahy12g1230 650 ProSiteProfiles Protein kinase domain profile. 316 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1230 650 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 417 628 - -
Ahy12g1230 650 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 6 277 - -
Ahy12g1230 650 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Ahy12g1230 650 SMART serkin_6 316 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1230 650 CDD STKc_IRAK 322 608 - -
Ahy12g1230 650 MobiDBLite consensus disorder prediction 625 643 - -
Ahy12g1230 650 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 286 406 - -
Ahy12g1230 650 Gene3D Phosphorylase Kinase; domain 1 279 391 - -
Ahy12g1230 650 MobiDBLite consensus disorder prediction 266 292 - -
Ahy12g1230 650 Pfam Protein tyrosine and serine/threonine kinase 320 603 IPR001245 GO:0004672|GO:0006468
Ahy12g1230 650 SUPERFAMILY Protein kinase-like (PK-like) 294 606 IPR011009 -
Ahy12g1230 650 Gene3D - 44 145 IPR038408 -
Ahy12g1230 650 Gene3D - 154 261 IPR038408 -
Ahy12g1230 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Ahy12g1230 650 ProSiteProfiles Gnk2-homologous domain profile. 41 146 IPR002902 -
Ahy12g1230 650 MobiDBLite consensus disorder prediction 625 650 - -
Ahy12g1230 650 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 417 628 - -
Ahy12g1230 650 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1230 Ahy-Chr12 39036665 39040796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1230 43 622 Receptor kinase-like Gene Family AT4G38830 45.800 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy12g1230 PK_Tyr_Ser-Thr 7.10E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1230 - - adu:107463438 1023.46