Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1224 ATGAATCTGACTGCAGAAAAACAAAAGGAGGAGAAACCTACAGCCTTATTCGAAGCTGGAAATGGCGCTTTTCCACCTCGTCAGATGTTAGGGCTTCGTCGTTCTTCACGGAAGCGAAGAAGCAGGAAGCGAGCGGCAGCGCGGATGGGAGGGCTTCGTCATTCTTCACGGAAGCGAAGAACCAGGAAGCGGGCGGCAGCGCGAAAAGGAGGGCTTCGTCGTTCTTCAGGGAGGCGAAGAACCAGGAAGCGAGCGGCAGCGCGGAAGGGAGGGCTTCGTCGTTCTTCACAGAAGCGAAGAAGCAGGAAGCGAGCGGCAGCACGGAAGGGAGGGCTTCGTCGTTCTTCGTTGGAGTATTGTCATCGCGATTCAGAGAAGAGAAGCATGTCTGCTAGGGCTTTTCATCCAATTTCAATCACTACCATTCTCTCATCCTCTTCCTATGCTGTATCTCTCGTTCGCTTATCCTCGCCGCCGCAACACGCCTCAGACGACGCCGCAACCTGCTTTCGCCACCACCGCGCAAGAAACTGTTTCAATGCTTGGAGGAACCGAAGTGCCGAAAATTTGTATGGTTATGCTGCAGAGGAAGCTCTTGGACAGGATGGGATTGAGCTGATTGTTGACCCCAGTGATTTTGCCTTGGCTGATGATATTGTGAACCATGTCGTAATGGGAGAGAGCTGGACTGGGCAAAACAAGATGGGAGAGCAGTTCCTGGCGGTGGCGACGAATACTCCTTTCTGTGATGATGATGGAAGTTTAGCATCAAAGGTAAGTAAAAAAGTTAAGTCAAGAATCCGGACAGGAGAAAATAACGGTGATCGTCAAAGCGGGAGCGAAGGAAGTCATCAATCTGAGCATTTTAGTTTCTCAGAAGTTGGTTTTGTAGACCATAGAGAGGATGCTAATTCCAGTAGAGCTAGCACACCCAGAGGTGATGTGATGCAGTCCCCTTTTGGTATATTTTCTCATGGTGAGGAAAGATCCCATGGAAAAAGTTTGAAAGAATCTGCCGATAATAGTGAAGGAAAATCTATTCACAAGATTATAACGTCTAGGGCTGAAGCATGGATTCAAAAGAAAACAATGGCATGGCCATGGAAAGCAAATGATCAAGAAAGATCGGAGGCAAAGGATGTCCGTGTTGCTGTGCCTTTCTTTTCAAATGATCATCAAGAAAATCAGTTAGTTAATCAGAAGCAAGAACACCAATAAGGTTAAAGGAATCGCCCTAGTAACAATGACGCTTCAGAATCCTGGTCCTCGTCCATCAATATTAACAGCACAAGTAGTGCCAGCAGCTGTGGAAGTGCTGAAGGTTGTGCTGTCAATAATAAAGTGGATATGGACACTAGTTGCTTGGATTATGAAATTTTTTGGACACTGATGGGGATTGGAAGCGCATTGACTTTGATGAAAGCTGCAAAGTACACCCCCGTTCAGAATTAG 1452 0.4731 MNLTAEKQKEEKPTALFEAGNGAFPPRQMLGLRRSSRKRRSRKRAAARMGGLRHSSRKRRTRKRAAARKGGLRRSSGRRRTRKRAAARKGGLRRSSQKRRSRKRAAARKGGLRRSSLEYCHRDSEKRSMSARAFHPISITTILSSSSYAVSLVRLSSPPQHASDDAATCFRHHRARNCFNAWRNRSAENLYGYAAEEALGQDGIELIVDPSDFALADDIVNHVVMGESWTGQNKMGEQFLAVATNTPFCDDDGSLASKVSKKVKSRIRTGENNGDRQSGSEGSHQSEHFSFSEVGFVDHREDANSSRASTPRGDVMQSPFGIFSHGEERSHGKSLKESADNSEGKSIHKIITSRAEAWIQKKTMAWPWKANDQERSEAKDVRVAVPFFSNDHQENQLVNQKQEHQ*G*RNRPSNNDASESWSSSININSTSSASSCGSAEGCAVNNKVDMDTSCLDYEIFWTLMGIGSALTLMKAAKYTPVQN* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1224 481 MobiDBLite consensus disorder prediction 392 424 - -
Ahy12g1224 481 MobiDBLite consensus disorder prediction 1 116 - -
Ahy12g1224 481 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 254 467 - -
Ahy12g1224 481 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 182 254 - -
Ahy12g1224 481 ProSiteProfiles PAS repeat profile. 184 227 IPR000014 -
Ahy12g1224 481 MobiDBLite consensus disorder prediction 324 346 - -
Ahy12g1224 481 MobiDBLite consensus disorder prediction 32 110 - -
Ahy12g1224 481 MobiDBLite consensus disorder prediction 326 346 - -
Ahy12g1224 481 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 254 467 - -
Ahy12g1224 481 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 182 254 - -
Ahy12g1224 481 Gene3D PAS domain 180 266 - -
Ahy12g1224 481 SUPERFAMILY PYP-like sensor domain (PAS domain) 182 254 IPR035965 -
Ahy12g1224 481 MobiDBLite consensus disorder prediction 272 288 - -
Ahy12g1224 481 MobiDBLite consensus disorder prediction 260 288 - -
Ahy12g1224 481 CDD PAS 184 254 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1224 Ahy-Chr12 37884442 37890563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1224 237 465 MAP Kinase Kinase Kinase AT3G06620 42.678 4.67e-45 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1224 - - ahf:112729971 765.377