Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1214 ATGGCAACTGCTGGTGTGCAAGAAGCTCGTCCTGCTCCACTAACTTCAACTTCCGAACCACCGCCTCTTTTTGATGGAACTACCAGGTTGTACATCTGTTATTATTGCCCCTATGCACAACGTGCATGGATCACCAGAAATTACAAGGGGCTGCAAGAGAAGATCAAATTGATTCCTATTGACCTTGGAAACAGGCCTGCTTGGTACAAGGAGAAAGTCTACCCTCAAAATAAGGTGCCGTCATTGGAGCACAATGGTAAGGTAATTGGAGAAAGTCTTGATTTGATCAAATATATAGATGCCAACTTTGAAGGGCCATCTCTTGTTCCAACGGATCCTGCAAAGAAAGAGTTTGGTGAGCAATTGGTGTCACAAGTTGATTCAGTCACCACAGATTTGTATGCTGCATTGAAAGGGGATGCTATACGACAAGCAAGTCCTATCTTTGATTCCTTTGAGAATGCTCTTGGAAAATTTGATGATGGGCCATTCTTCCTTGGTCAATTCAGCTGGGTGGATATCGCCTATCTTCCATTCATTGAAAGATTCCACGTGGTCTTTGCTGAGGTTTTCAAGCATGACATCACTGAAGGAAGGCCTAAACTTAGAGCATTCATTGAGGAGGTGAACAAGATTGATGCATATACACAAACAAGGTTTGACAGAAAGGAACTTGTTGATCTTTACAAGAGACGTTTCTTGCCCCAACAGCAGTGA 717 0.431 MATAGVQEARPAPLTSTSEPPPLFDGTTRLYICYYCPYAQRAWITRNYKGLQEKIKLIPIDLGNRPAWYKEKVYPQNKVPSLEHNGKVIGESLDLIKYIDANFEGPSLVPTDPAKKEFGEQLVSQVDSVTTDLYAALKGDAIRQASPIFDSFENALGKFDDGPFFLGQFSWVDIAYLPFIERFHVVFAEVFKHDITEGRPKLRAFIEEVNKIDAYTQTRFDRKELVDLYKRRFLPQQQ* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1214 238 Gene3D Glutaredoxin 1 104 - -
Ahy12g1214 238 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 236 IPR044629 GO:0004364
Ahy12g1214 238 Gene3D - 105 236 - -
Ahy12g1214 238 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Ahy12g1214 238 Pfam Glutathione S-transferase, C-terminal domain 141 207 - -
Ahy12g1214 238 MobiDBLite consensus disorder prediction 1 21 - -
Ahy12g1214 238 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Ahy12g1214 238 SUPERFAMILY Thioredoxin-like 18 108 IPR036249 -
Ahy12g1214 238 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 236 - -
Ahy12g1214 238 SFLD Main (cytGST) 29 210 - -
Ahy12g1214 238 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Ahy12g1214 238 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1214 Ahy-Chr12 36610384 36614681 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1214 8 234 Glutathione S-transferase Gene Family AT5G02790 66.960 5.42e-117 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1214 K00799 - gmx:100793025 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1214 12 36610384 36614681 Ahy2g1092 2 33249810 33253944 hybridization
Ahy16g1537 16 35088810 35091419 Ahy12g1214 12 36610384 36614681 PCT
Ahy6g1389 6 23312728 23315179 Ahy12g1214 12 36610384 36614681 PCT
Ahy12g1214 12 36610384 36614681 Ahy16g1537 16 35088810 35091419 PCT
Ahy12g1214 12 36610384 36614681 Ahy6g1389 6 23312728 23315179 PCT