Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1213 ATGGCAACTGCTGCTCTGAAAGAGATTCTTCCACCGTCTTTGACTTCAGTATCCGATCAACCTCCTCTTTTTGATGGAACCACCAGGTTGTACACCAGTTATACTTGTCCCTTTGCACAACGTGTATGGATCACTAGAAACTACAAGGGACTACAAGAGAAGATCAAATTGGTTGCTATTGACCTTGGGGACAGGCCTGCTTGGTACAAGGAGAAAGTTTACCCTGAAAATAAGGTGCCATCATTGGAGCACAACGGTAAGGTCATTGGAGAAAGCCTTGATTTGATCAAATACGTAGATGCAAACTTCGAAGGCCCCTCTCTGGTTCCCAGTGATCCTGCAAAGAAGGAGTTTGGTGAGAAGCTGGTGTCTGAAGTTGATTCAGTCACCAGAGAGTTGTTCTCTGCCTTGAAAGGGGATGCTATACAACAAACAAGTTTTGTTTTTGATTCCTTGGAGAATGCTCTTGGTAAATTTGATGACGGTCCATTCTTTCTTGGTCAATTCAGTTGGGTGGATATTGCTTATATCCCATTTATTGAAAGATTCCAAGTTGTCCTTGCTGAGGTGTTCAAGCATGACATCACTGAAGGAAGGCCTAAACTTAGAGCTTGGATTGAGGAGGTAAACAAGATTGATGCTTATGCACAAACAAGGACTGATCCAAAGGAAATAGTTGAGCTTTTCAAGAAACGTTTCTTGCCTCAGCAGTGA 714 0.4286 MATAALKEILPPSLTSVSDQPPLFDGTTRLYTSYTCPFAQRVWITRNYKGLQEKIKLVAIDLGDRPAWYKEKVYPENKVPSLEHNGKVIGESLDLIKYVDANFEGPSLVPSDPAKKEFGEKLVSEVDSVTRELFSALKGDAIQQTSFVFDSLENALGKFDDGPFFLGQFSWVDIAYIPFIERFQVVLAEVFKHDITEGRPKLRAWIEEVNKIDAYAQTRTDPKEIVELFKKRFLPQQ* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1213 237 SFLD Main (cytGST) 29 210 - -
Ahy12g1213 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Ahy12g1213 237 SUPERFAMILY Thioredoxin-like 22 108 IPR036249 -
Ahy12g1213 237 CDD GST_C_Lambda 112 230 - -
Ahy12g1213 237 Pfam Glutathione S-transferase, C-terminal domain 142 207 - -
Ahy12g1213 237 Gene3D Glutaredoxin 1 104 - -
Ahy12g1213 237 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Ahy12g1213 237 Gene3D - 105 236 - -
Ahy12g1213 237 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 236 - -
Ahy12g1213 237 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Ahy12g1213 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Ahy12g1213 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 236 IPR044629 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1213 Ahy-Chr12 36440338 36444244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1213 11 234 Glutathione S-transferase Gene Family AT5G02790 72.321 1.74e-120 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1213 K00799 - gmx:100793025 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1213 12 36440338 36444244 Ahy2g1090 2 32774478 32778107 hybridization