Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1208 ATGACAAGGGAAGTCCAGATGAGTGTTGATGGCGATGAGGAAGAGCTGAAAGAACTGAGCCAGCGCTTACGTGATGGGAAGAGGACGTTTCCCGATGGGGTTGCCAGTGAAGGACAAGGTTTACACGAGGATGATGGAGCAAAATGTAACGGAGTTGGTGAAGATGTTAAGGTTGGAGGACAGGGAGGGACCGTGGAATCCTCTTCCGTCCTGCAGCATGTGCCACAGCAACAGCCTCAAGGGGCAGTGATTTGTTGGGAGAGGTTTTTACATATAAGATCTCTTAAGGTCTTGCTTGTGGAGTATGATGACTCGACGCGCCATGTTGTTACTGCATTGCTACGCAATTGTAGCTATGAAGTTATTGAAGCCGCAAATGGATTGCAAGCTTGGAAGATTTTGGAGAATTTAACCAATCATGTTGACCTTGTTTTAACTGAAGTAGCAATGCCTGGCTTATCCGGCATTGGTCTCTTATGCAAGATTATGAGCCACAAGACACGGAAAAACATTCCAGTAATTATGATGTCATCTCGTGACTCTATGGGTTTAGTCTTCAAGTGTTTGTCAAAGGGTGCTGTTGACTTCCTAGTCAAACCCGTAAGGAAGAATGAGCTTAAAAACCTTTGGCAGCATGTTTGGAGGAGATGCCATAGTTCCAGTGGCAGTGGCAGTGAAAGTGGCACACAAACCCAGAAGTCAGTAAAATCAAAGAGTCTTGAGAAATCTGATAATAATTCTGGAAGCAACGATGAAGATGATAATGGAAGTATAGGCCTGAATAATGGGGATGGAAGTGACAATGGCAGTGGCACTCAGAGCTCCTGGACCAAACAAGCTGTAGAAGTTGATAGTCCCAAACCAGTTTCCCGCTGGGATCAAATAGCTGAGTGCCCTGATAGCACATGTGCTCAGGTTGTCCACTCCAATGCTGAAATATGTGGAATAAAGATGGTTCCTCCATCTACAAAGGAGGGTCAAGAACAAAATGAACGTCTTATCAAAGCTGCAGGTTCAAAACATAGCAATACAATTGATGTAGGGCCCTCAAAATTCAATGATCAAAGTAATAGAGGACAGCAGGATAATTGTGGGAATCAATCCAACAACCCTAGCTGCAAAGGTCCTTCACTGTCTGATGCCATCACTAGCACTTCTGGATCTCAGATGCATACAGCAGAATTTGAAGCCAAAGATAGAAGACCCATGTCCTTAGACATTGAAAATAAATGCACTATTGATGCTAAGGACTTACCATCTCTTGAGCTTAGTTTAAAGAGGCTTAGAGGAGTTAAAGATGCTGGCATTACAATTCAGGATGAACGGAATGTTTTAAGACGTTCTGACCTTTCTGCCTTCTCAAGGTACAATGCAGCCTCTAACACTAAGAAGTCGCCCACTAGATATGCTGGAAGCAATTCTCCACATGATAATAGCCTAGAAGTTACAAAGAGGGATTCATCTCGTGACATTCAGTCACATTCTAGTGGCAATCCTCCTAATCAAAATTCAAATGGTGCGAGCAATAACAATGATATGGGTTCTACTACTAATAATGCTTTTACAAAATCTGCAGTCATAAGTGAGCCAGCAGTGGCATCAACAACAAAATGTTTGTACCAATCATCTGCTTTCCAGCCTGTAAAGAGCAACCTTAAGTGTACCTCCCAAACAGTTGTTTTACATAATACTGAAGATCCAACAGCAACAATGCTGGTACCACCTAGGGTAGACACTCACAAGGATTTGACAACTAAGGACTTCCATCACCATTATGAAAACCAGAACATCATTGCTAACAACATGAAGCACCAGCTTCAACCTGATCATGATGCTGAATCATCAAAGAAATTAGCTGCTGCTGCTGCTCCACATTGTGGTTCTTCAAACGCAGTTGAAGTGCTAGTTGAAGGTAATATTGGAAATTTTAGTCTCAACAGAAGTGCTTCAGGCAGCAACAATGGGAGCAATGGACAAAATGGAAGCAGCACAGCAGTTGATGCTGGAGGGACAAACATAGAAAGCAGCAATCCACTTGCTGGGAATAGTGGAAGTGGTGATGCTAGTGGGAGTGGAAGTGCCAACAAGGTAGATCAAAAGAAGAGTTCTCATAGGCAAGCAGCCTTAACTAAGTTTCGTCAGAAAAGGAATCAGAGAAATGAGAGATCCTTTCATAAAAAGGTTCGATATCAAAGCAGAAAGAAATTAGCTGAACAGCGACCGCGATTCCGTGGCCAATTCATACGGCAGTCGTCTAGTGAAACTGCAAGTGATGCAACAGAAAAGTGA 2289 0.4308 MTREVQMSVDGDEEELKELSQRLRDGKRTFPDGVASEGQGLHEDDGAKCNGVGEDVKVGGQGGTVESSSVLQHVPQQQPQGAVICWERFLHIRSLKVLLVEYDDSTRHVVTALLRNCSYEVIEAANGLQAWKILENLTNHVDLVLTEVAMPGLSGIGLLCKIMSHKTRKNIPVIMMSSRDSMGLVFKCLSKGAVDFLVKPVRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSLEKSDNNSGSNDEDDNGSIGLNNGDGSDNGSGTQSSWTKQAVEVDSPKPVSRWDQIAECPDSTCAQVVHSNAEICGIKMVPPSTKEGQEQNERLIKAAGSKHSNTIDVGPSKFNDQSNRGQQDNCGNQSNNPSCKGPSLSDAITSTSGSQMHTAEFEAKDRRPMSLDIENKCTIDAKDLPSLELSLKRLRGVKDAGITIQDERNVLRRSDLSAFSRYNAASNTKKSPTRYAGSNSPHDNSLEVTKRDSSRDIQSHSSGNPPNQNSNGASNNNDMGSTTNNAFTKSAVISEPAVASTTKCLYQSSAFQPVKSNLKCTSQTVVLHNTEDPTATMLVPPRVDTHKDLTTKDFHHHYENQNIIANNMKHQLQPDHDAESSKKLAAAAAPHCGSSNAVEVLVEGNIGNFSLNRSASGSNNGSNGQNGSSTAVDAGGTNIESSNPLAGNSGSGDASGSGSANKVDQKKSSHRQAALTKFRQKRNQRNERSFHKKVRYQSRKKLAEQRPRFRGQFIRQSSSETASDATEK* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1208 762 MobiDBLite consensus disorder prediction 343 392 - -
Ahy12g1208 762 Pfam Response regulator receiver domain 97 208 IPR001789 GO:0000160
Ahy12g1208 762 MobiDBLite consensus disorder prediction 219 236 - -
Ahy12g1208 762 MobiDBLite consensus disorder prediction 1 48 - -
Ahy12g1208 762 MobiDBLite consensus disorder prediction 706 733 - -
Ahy12g1208 762 MobiDBLite consensus disorder prediction 492 517 - -
Ahy12g1208 762 MobiDBLite consensus disorder prediction 457 517 - -
Ahy12g1208 762 MobiDBLite consensus disorder prediction 650 697 - -
Ahy12g1208 762 SUPERFAMILY CheY-like 93 219 IPR011006 -
Ahy12g1208 762 MobiDBLite consensus disorder prediction 337 392 - -
Ahy12g1208 762 MobiDBLite consensus disorder prediction 457 478 - -
Ahy12g1208 762 ProSiteProfiles CCT domain profile. 708 750 IPR010402 GO:0005515
Ahy12g1208 762 MobiDBLite consensus disorder prediction 1 31 - -
Ahy12g1208 762 PANTHER TWO-COMPONENT RESPONSE REGULATOR 39 738 IPR045279 GO:0009736
Ahy12g1208 762 SMART REC_2 95 210 IPR001789 GO:0000160
Ahy12g1208 762 Coils Coil 9 29 - -
Ahy12g1208 762 MobiDBLite consensus disorder prediction 219 288 - -
Ahy12g1208 762 ProSiteProfiles Response regulatory domain profile. 96 214 IPR001789 GO:0000160
Ahy12g1208 762 MobiDBLite consensus disorder prediction 250 281 - -
Ahy12g1208 762 MobiDBLite consensus disorder prediction 745 762 - -
Ahy12g1208 762 CDD psREC_PRR 97 200 - -
Ahy12g1208 762 Pfam CCT motif 705 750 IPR010402 GO:0005515
Ahy12g1208 762 Gene3D - 94 250 - -
Ahy12g1208 762 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 39 738 - -
Ahy12g1208 762 MobiDBLite consensus disorder prediction 650 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1208 Ahy-Chr12 35858226 35869399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1208 171 755 Response Regulator Gene Family AT5G02810 45.774 4.76e-106 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Ahy12g1208 Response_reg 1.90E-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1208 K12129 - gmx:100796933 1085.09