Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1194 ATGCTCTGGTGTTTCCTTAATATTCTATTTTACTTATGCATATATTCTTTGGAAATAGCTCTAACATTTTTGGACCATGGAGTACTAACTTTGTTAAAGAATTGGCTTGAGCCACTTCCTGATGGAAGCTTGCCAAATATTAACATACGCACAGCAATTTTGACTATTTTAAATGTTTTTCCTATTGACCTAGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTTGGGAAGGTGATCATGTTCCTATCGAAGTCCGACGAAGAAATCAATGTAAATAGAAAACTAGCTAAGAAACTGGTTGACAAATGGAGCCGACCCATATTTAATAAGAGTACACGGTTTAAGGACATGAGAAATGCTGAGGACGATAGGATTCCTTTCAGGAGGCCAACTGTTAATAAGTGCTCAACCATTCTGATTTAA 432 0.3704 MLWCFLNILFYLCIYSLEIALTFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILTILNVFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEINVNRKLAKKLVDKWSRPIFNKSTRFKDMRNAEDDRIPFRRPTVNKCSTILI* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1194 143 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 14 116 IPR035441 -
Ahy12g1194 143 PANTHER PROTEIN IWS1 HOMOLOG 1 21 138 IPR044204 GO:0009742|GO:0032784
Ahy12g1194 143 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 22 115 IPR035441 -
Ahy12g1194 143 ProSiteProfiles TFIIS N-terminal domain profile. 30 113 IPR017923 -
Ahy12g1194 143 Pfam TFIIS helical bundle-like domain 64 110 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1194 Ahy-Chr12 33832165 33833668 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Ahy12g1194 Med26 6.50E-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1194 K17498 - gmx:100801805 218.779