Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1157 ATGTCTTTCCCCAATCAAGCATTTTGGATGGCAAAGGATCCTGGAAGTTTGAATGATGGTGACATGACATGTGACGAATCTTCTAGAATTGAGTCCAAGAGATCTCATCAATGGTTCATGGATGGTCCTGAAGTGGATGTATTTCCCAATAAGAAACAGGCAGTAGTGCCCCCAAACAATTTACTGTCAGGAATGCTTAACTCCAATCTTTCTTCATGGGGAAATTCCTCAAGTTTCCAATCCTTAACCGATGATTTCACTGCACAATTGTTTGACCCAGATACAGCTACTACCAATCATGGGGATGCAAATATTTCATCTCTTAGCATGGACAATAAGTCAGGTGGTGAGAGAAAGGATAGCATGAATCCCTTCGGGAGTGGTTCATCATTTGGTTTATCTATGTCCTGTACATTGGATGATCCTCGTTTAGCTTTCAATTATGATGGAATTAGAAAAATTAAAGTTAATGAAGTGAAGGAATCTCATAGTGTCATGTCTGTCCCTGAAAATAATCCCTATGAAAAGGGAGTCAGCAGCACCGTGTTAAATTCTCAAGCATACAGCGCTGATGATAATTCCATATCAACGAATCTTGCTTATACCAAAGGGGATGCTAATATAATATCAATGGATGACCCGTACAGCAGGACAGATAACAATTTAATGTCAGTGGTTCAATCTCATAACAAGGGAGGGGATGGCTTATCTATCCATCAAACTTACAAAGATATTTGTAATACAATATCAATGGACCAAGGATTTAGCAAGGTGGATAGCAGCATGACATCTGTTGCTCAAGCTTATAAGGCCGATGACAATTCTATGTTAAGAGATTACTTATTCGACAAGGTTGAAAATGGCACCATATCAGCGGGTCACCCATATGGCATGGGAGGAAACAACATGCCATTTGTTTCACATTCTTATAATAGTGGGGAGAGCACTATCATATCCTTTGGTGGCTGTGATGATGATGATCCAACTCACTCTGGCCTATTCATTTCCAACTATGACATGTTGACGGGTCAAGCACTTCCACAGAAGTTGGAAGCTGTGAATGAGAAAGAGTTTGTCAGATCTAATTCTAATTTACTTCTAAATACAGCTCAGACATCTGCATCTGAAACTGAAAGTGTTTCCAAGACAAAAGAAGAGATAAAAATGTCTAAGAAAGCTACTTCAAACAACTTCCCTTCAAATGTCAGAAGTTTGCTATCCACTGGCATGCTTGATGGTGTCTCTGTAAAGTATAAGGCATGGTCGCGGGAGGAGCTTCGAGGAGTTATAAACGGTGCTGGGTATTTATGCAGTTGCCAGTCTTGTAATTTTTCCAAGGTTATTAACGCATATGAGTTTGAACGACATGCTGGTTGCAAGACAAAACACCCCAATAATCATATTTACTTTGAGAGTGGGAAAACTATATATGGTGTTGTACAAGAGCTCCGGAGCACTCCACAGAATATGTTATTTGATGTTCTTCAGACAGTAACTGGTTCAGCAATCAATCAGAAGTCCTTCCGCATTTGGAAAGAATCCTTTTTGGCTGCGGCTCGGGAACTCCAGCGCATTTGTGGAAAAGGTGAAGTGAAGTAG 1599 0.4021 MSFPNQAFWMAKDPGSLNDGDMTCDESSRIESKRSHQWFMDGPEVDVFPNKKQAVVPPNNLLSGMLNSNLSSWGNSSSFQSLTDDFTAQLFDPDTATTNHGDANISSLSMDNKSGGERKDSMNPFGSGSSFGLSMSCTLDDPRLAFNYDGIRKIKVNEVKESHSVMSVPENNPYEKGVSSTVLNSQAYSADDNSISTNLAYTKGDANIISMDDPYSRTDNNLMSVVQSHNKGGDGLSIHQTYKDICNTISMDQGFSKVDSSMTSVAQAYKADDNSMLRDYLFDKVENGTISAGHPYGMGGNNMPFVSHSYNSGESTIISFGGCDDDDPTHSGLFISNYDMLTGQALPQKLEAVNEKEFVRSNSNLLLNTAQTSASETESVSKTKEEIKMSKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREELRGVINGAGYLCSCQSCNFSKVINAYEFERHAGCKTKHPNNHIYFESGKTIYGVVQELRSTPQNMLFDVLQTVTGSAINQKSFRIWKESFLAAARELQRICGKGEVK* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1157 532 Pfam Tify domain binding domain 428 483 IPR032308 -
Ahy12g1157 532 PANTHER PROTEIN, PUTATIVE-RELATED 5 531 - -
Ahy12g1157 532 MobiDBLite consensus disorder prediction 97 112 - -
Ahy12g1157 532 PANTHER AUTOIMMUNE REGULATOR 5 531 - -
Ahy12g1157 532 MobiDBLite consensus disorder prediction 97 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1157 Ahy-Chr12 30722989 30726978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1157 387 515 PHD Transcription Factor Family AT3G53680 56.923 4.41e-43 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1157 - - mtr:MTR_1g067750 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1157 12 30722989 30726978 Ahy2g1044 2 26974981 26978911 hybridization