Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1156 ATGAATATGAATGTATGTTGTGATATTGTTGTGGCGCAGCTGAGTTGTATGTTCATCATGGAGAGTAGCAGTAATTGGTACGAAAGGTCAAAGCCATTCATAGCTGTTACTTTTCTTCAGTTTGGATTTGCAGGCATGGATGTTCTATCCAAAGCTGCTATGAACAAAGGGATGAGCAACTACGTCCTCGTCGTCTATCGCCACCTCGTTGCCTTCTTCGCCATAGCTCCTTTTGCTCTTTTCCTTGACAAGAAAGTGAGGCCTAAAATGACATTTTCAATCTTCATGAAGATAGTGGCACTCAGCATCCTAGAGCCAGTTATTGATCAGAACTTGTATTTTTTGGGGATGAAGTACACAACAGCAACTTTTGCTGCTGCCATGACCAACATGCTTCCTGCCATTACCTTCTTCATGGCTTGCATTCTTAGACTAGAGAAGATTAAAATAAAAAGTATTCGTAGCATAGCAAAGGTGGTTGGAACTCTAGCGACCGTTTCTGGTGCCATGGTGATGACACTGTTGAAAGGGCCAATTATTGAGCTTTTTGGAAGACATGGAGGCAGTAACCACAATCTTCATCACGATGCTGATGAAAATACTCAACATGCAATAAAAGGATTTATTATGATCACAATAGGCTGTTTTAGTTGGGCCTGTTTCGTGATCCTCCAAACTATAACCCTTGAAGCCTACCCTGCTGAGCTCTCTCTTACGGCATGGATATGCATTTTGGGAGCAGCTGAAGGTGCTGCAGTTGCTATGATTATGGAAAGAGCCAACCCTTCTGTTTGGTATCTGAAATGGGATATGAAATTGCTTGCTGTTGTCTACAGTGGCATAGTGTGTTCAGGACTGGCTTATTACATGCAAGGATTGGTGTTGAAAACAAGAGGCCCAGTCTTTGTAACAGCATTTAATCCCCTCTGCATGGTAATTGTTGCTATTATGGGCTCCCTCATTCTAGCAGAGAAACTATTTCTTGGCAGGTTGATTGGTGCCATTGTCATTGTTTTGGGCCTGTACCTTGTAGTGTGGGGTAAAAGCAAAGATTACAAGCCACCAAGTAATGAACCTGTATTGCCAGCTAAACAAGTTACAGAGGAAGCCAACACCAAAAAGGAACATTGTAATCACCACCACATTGCCATCAGTAATTTAAGAGCTGGAATCACAACACTAGAAGAACAAGCATGA 1197 0.4219 MNMNVCCDIVVAQLSCMFIMESSSNWYERSKPFIAVTFLQFGFAGMDVLSKAAMNKGMSNYVLVVYRHLVAFFAIAPFALFLDKKVRPKMTFSIFMKIVALSILEPVIDQNLYFLGMKYTTATFAAAMTNMLPAITFFMACILRLEKIKIKSIRSIAKVVGTLATVSGAMVMTLLKGPIIELFGRHGGSNHNLHHDADENTQHAIKGFIMITIGCFSWACFVILQTITLEAYPAELSLTAWICILGAAEGAAVAMIMERANPSVWYLKWDMKLLAVVYSGIVCSGLAYYMQGLVLKTRGPVFVTAFNPLCMVIVAIMGSLILAEKLFLGRLIGAIVIVLGLYLVVWGKSKDYKPPSNEPVLPAKQVTEEANTKKEHCNHHHIAISNLRAGITTLEEQA* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1156 398 PANTHER WAT1-RELATED PROTEIN 26 357 - -
Ahy12g1156 398 PANTHER WAT1-RELATED PROTEIN 26 357 IPR030184 GO:0016021|GO:0022857
Ahy12g1156 398 Pfam EamA-like transporter family 206 345 IPR000620 GO:0016020|GO:0016021
Ahy12g1156 398 Pfam EamA-like transporter family 41 160 IPR000620 GO:0016020|GO:0016021
Ahy12g1156 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 66 162 - -
Ahy12g1156 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1156 Ahy-Chr12 30718432 30722995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1156 28 386 Nodulin-like Gene Family AT2G37460 61.538 6.64e-164 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1156 - - ahf:112727266 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1156 12 30718432 30722995 Ahy2g1043 2 26970568 26974998 hybridization
Ahy16g1489 16 32278329 32282008 Ahy12g1156 12 30718432 30722995 PCT
Ahy6g1348 6 20784494 20787994 Ahy12g1156 12 30718432 30722995 PCT
Ahy12g1156 12 30718432 30722995 Ahy16g1489 16 32278329 32282008 PCT
Ahy12g1156 12 30718432 30722995 Ahy6g1348 6 20784494 20787994 PCT