Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1119 ATGAAGAAACAGGAAGAACAGTGTAACAGAGAATCTAAGAAGGGTCACATTGTAACTTGGACTCAAGAGGAAGATGATATACTGAGAGAGCAGATTGGTATCCATGGAACTGAAAAATGGTACACTTACTTGAATTCTGATTTCAAGAAAGGTGGATGGTCACCAGAGGAAGACATGCTCTTATGTGAGGCTCAAAAATTATATGGCAACAGATGGACAGAAATAGGGAAAGTGGTTTCAGGAAGAACGGATAATGCTGTGAAAAATCGCTTCTCTATGCTCTGCAGAAAGAGGCAAAAATATGAAGCTTTAGCTAAAGAGAACAGCATTTCATCACACATCAATTCAAATAACAAGAAAATTGTTTTCCAACATGCTTATAATACAGATGCAACATCAGAATCTGCTATATCTATCAAGAAAACGAGGTAA 432 0.3704 MKKQEEQCNRESKKGHIVTWTQEEDDILREQIGIHGTEKWYTYLNSDFKKGGWSPEEDMLLCEAQKLYGNRWTEIGKVVSGRTDNAVKNRFSMLCRKRQKYEALAKENSISSHINSNNKKIVFQHAYNTDATSESAISIKKTR* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1119 143 PANTHER TRANSCRIPTION FACTOR MYB88 10 40 - -
Ahy12g1119 143 Gene3D - 52 129 - -
Ahy12g1119 143 PANTHER TRANSCRIPTION FACTOR MYB88 39 117 - -
Ahy12g1119 143 PANTHER MYB PROTEIN-RELATED 39 117 - -
Ahy12g1119 143 PANTHER MYB PROTEIN-RELATED 10 40 - -
Ahy12g1119 143 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 99 IPR017930 -
Ahy12g1119 143 ProSiteProfiles Myb-like domain profile. 45 95 IPR001005 -
Ahy12g1119 143 Pfam Myb-like DNA-binding domain 50 92 IPR001005 -
Ahy12g1119 143 SMART sant 49 97 IPR001005 -
Ahy12g1119 143 CDD SANT 53 91 IPR001005 -
Ahy12g1119 143 SUPERFAMILY Homeodomain-like 38 103 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1119 Ahy-Chr12 28374154 28375411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1119 13 143 MYB Transcription Factor Family AT2G02820 58.553 1.65e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy12g1119 Myb_DNA-binding 2.80E-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1119 K09422 - ahf:112727230 280.026