Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1108 ATGAACAACCAATACTCTCAAAACCAATGCAATGCAGCGGTTATGAATTCTCAAGGAACACCAATGGAAGAGACTTATGTCCCTGAGACTGTGATGATGGAAGAGAATGGAGGTCTCCCAAAGCGCCAGACCCACCAGACCTCCACTCAATTGACACAGATATCATGGTGGAAGCAGCGAAAAAACCATGAAGAGGAGGTGCTCAGGAAGAATAGAGAAAATATGTATAAAGAAGAGAGACAGGGGTATGAAGATAGTGAGAGGAATGCCAATGAGATTGGTGATCCAGTTGAGGAGACCTCCCTCAGCAGAGAAGAAAAGCAGATGGAGCAGTACAAAGGGAAGAAGGGATATATGGTGATTAAGTTTAACTTTGAGAAGGCTTATGATCGGGTTGACGAAATTACCGACGTCATTGTGACTAGAAAGGATGAGTTGGACTCGAGACACAAGGTCGACAAAATTACCGACGTCATTGTGACTAGAAAGGATGAGTTGGACTCGAGACATGAGTTGCCGGATCATAGTGGGGTCAGTGAAGAGAAAATTCCAGTCATAGGAATAAGTTTTGGTTCGTTGTCTCTGGCACAGAAATTTTATGAAAACTATGCAAAGAAAGTTGGGTTCGTTACTAAAATCAGGAACACGAATTTTGACAAGACGCTGAAGGAATCAAAGATACCGGTTAATCAATCTATTCAATGCACGCGAGAAGGTTATCGAGAGTCTCGGGTGAACGTAGCAACTTGGACAAACAGAATTACAGCCACGAGATGCAGAGCAAGGATGTATGTCATGCTGGACAAGGAGAAGGAAAGTTGGGTTGTCTCTAGATTAGAATTGAGACATTCTCACCCCTGTTTGGCTAAGAAAGCTGTCCACTATCATGAGTATCGGGAGTTGGCCATGCATGCTAAGTGCGTCATTACGGATAACGACGAGGCTAGCATAAAACCCAACAAGACGTATCTAGCACTGGCAAACGAGGTTGGTGGGTCTTCAAACCTGAGTTTTTCAGAAAAGAATGTCAGAAATTACATTACAAGAAAACTCCGATGTGCCGACGACAATGCGGACTTTAAGGGGATGATGAATTATTTCGTTCGAATGAAGGAGATCAATCCCAACTTCTTTTATGCCATAGATGTTGACGATGCTAATAAATTCAGAAGCGCACTCCGAGTAGATGTAAGGTGCAAGGCTTCGTATGAATATTACGGAGATGTGGTGTCGTTTGACACCACTTACAGAAGAAACAGGCATGGTCTACCATTTGCATTCTTTGTCGGTGTAAACCACCATGGAAAGTCTACTCTTCTTGGTTGTGCTTTACTTGGGAGAGAGAAGATCCCTAGTTTTGAGTGGGTGTTCACGCAATGGGTGAGATGTGTCGGGACTGCGCCAAGGGGGATCATCACTGACCAATGCAAGGCCATGACCGGTGCTATTAGGAAGGTCCTACCAGATATTGTCCACCGATGGTGCATCTAG 1491 0.442 MNNQYSQNQCNAAVMNSQGTPMEETYVPETVMMEENGGLPKRQTHQTSTQLTQISWWKQRKNHEEEVLRKNRENMYKEERQGYEDSERNANEIGDPVEETSLSREEKQMEQYKGKKGYMVIKFNFEKAYDRVDEITDVIVTRKDELDSRHKVDKITDVIVTRKDELDSRHELPDHSGVSEEKIPVIGISFGSLSLAQKFYENYAKKVGFVTKIRNTNFDKTLKESKIPVNQSIQCTREGYRESRVNVATWTNRITATRCRARMYVMLDKEKESWVVSRLELRHSHPCLAKKAVHYHEYRELAMHAKCVITDNDEASIKPNKTYLALANEVGGSSNLSFSEKNVRNYITRKLRCADDNADFKGMMNYFVRMKEINPNFFYAIDVDDANKFRSALRVDVRCKASYEYYGDVVSFDTTYRRNRHGLPFAFFVGVNHHGKSTLLGCALLGREKIPSFEWVFTQWVRCVGTAPRGIITDQCKAMTGAIRKVLPDIVHRWCI* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1108 496 Pfam FAR1 DNA-binding domain 198 288 IPR004330 -
Ahy12g1108 496 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 170 496 - -
Ahy12g1108 496 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 170 496 IPR031052 GO:0006355
Ahy12g1108 496 MobiDBLite consensus disorder prediction 79 104 - -
Ahy12g1108 496 Pfam MULE transposase domain 409 496 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1108 Ahy-Chr12 27932038 27952702 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g1108 FAR1 1.00E-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1108 - - aip:107627064 1018.07