Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1092 ATGGTTTCTTTTGGAAGTTGTAGTATTTATAGAAGAACAGAGAATCGTTTTCTTATGTGTTCAATTCTCAAATTTCGTAGCATATATGGTTCCTTTAAATTCTTTCATTCTAAACTTAACCGGGGTTCCAGTGCTTCAGATAAAACCTCCAAACTGGAACCAAATAGGAATAATCACAATAGGGTAGGGATTTTTTGGGACTTAGATAACAAGCCACCAAACCCAATTCCACCTTATGAAGTTGCCAATAAGCTTAGAATTGTTGCATCTTCATTTGGGGTTGTTAGGCATATGGTAGCTTATGCAAATAGCCACACTTTCAGCAGTGTCCCACACGCTGTCCGGCAGAGGAGGAAAGAGAAGGAGCTGTATAACCGACTGGAGAGCAAGGGCGTCATCAAGCGGAATGAGCCTCATGTTTGCAGGGTTTGTGGGAGAAAGTTTTACACTAATGAGAAGCTTGTTAACCATTTCAAGCAGCTACATGAGAGCGAGCAAACGAAAAGGGTAAACCAGATAGCGTCGGCAAGGGGGAGCCGGAGGGTGAAGTTGGTGGCAAAGTATTCGATGAAGATGGAAAAATATAAGAAGGCTGCAAGGGATATTCTTACTCCAAGAGTAGGGTATGGTTTGGCGGATGAGCTCAAACGCGCAGGATTTTGGGTTCAGACCGTGTTGGATAAGCCACAGGCTGCGGATCGTGCATTGGAAAGTCACATGGTTGATATGATGGATCATAGGAGGGTTGAGTGCATAGTACTTGTGTCTGATGATTATGATTTCGCTAATGTAATAAGGGAAGCGAAGCTACGATGTCTGAAGACAGTTGTCATTGGGGATACTAGTGATGGTGTATTGAAGAGGATTGCTGATACGTCCTTTTCTTGGGAGGAAATTCTAATGGGGAAAGCTAAAAAGGAGGCTGTATCAGTTGTTGAGAATTGGAAGGATCGTGATATTTTGAAAAGGTTAGAGTGGACATACAATCCAGAGGTGGATAAAAAGAAATACGATCCGGCTGATGTGGTTATTGAAGAATCAGAAGATGAGAATATTGAAGATATTTGTGATGATGTTGATGATGACTATAAGGATGGTGGAGGTGCTTGGTGGGAGTTAGATTCAGATGAAAATGTCACAAATGAACAGACACGAAAAGTATAG 1164 0.4184 MVSFGSCSIYRRTENRFLMCSILKFRSIYGSFKFFHSKLNRGSSASDKTSKLEPNRNNHNRVGIFWDLDNKPPNPIPPYEVANKLRIVASSFGVVRHMVAYANSHTFSSVPHAVRQRRKEKELYNRLESKGVIKRNEPHVCRVCGRKFYTNEKLVNHFKQLHESEQTKRVNQIASARGSRRVKLVAKYSMKMEKYKKAARDILTPRVGYGLADELKRAGFWVQTVLDKPQAADRALESHMVDMMDHRRVECIVLVSDDYDFANVIREAKLRCLKTVVIGDTSDGVLKRIADTSFSWEEILMGKAKKEAVSVVENWKDRDILKRLEWTYNPEVDKKKYDPADVVIEESEDENIEDICDDVDDDYKDGGGAWWELDSDENVTNEQTRKV* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1092 387 Gene3D - 54 300 - -
Ahy12g1092 387 CDD PIN_LabA-like 149 280 - -
Ahy12g1092 387 ProSiteProfiles Zinc finger C2H2 type domain profile. 139 167 IPR013087 -
Ahy12g1092 387 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 34 380 - -
Ahy12g1092 387 Pfam NYN domain 211 292 IPR021139 GO:0004540
Ahy12g1092 387 PANTHER - 34 380 - -
Ahy12g1092 387 ProSitePatterns Zinc finger C2H2 type domain signature. 141 162 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1092 Ahy-Chr12 26534496 26536764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1092 61 384 C2H2 Transcription Factor Family AT4G12240 57.485 5.44e-140 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy12g1092 NYN 1.40E-06 CL0280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1092 - - lang:109328008 538.11