Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1086 ATGTTGAAAGCAGAAGAAAATTCCAATCACAAGCAACCAAATGTAGTTGCCAAATTAATGGGGCTTGATGAAGCACTTCCAAGGGGAGAGGCTAATTTATTTTTGGAGAGAAAACATGAAAAGTGTTATTCTCAACACATTTATGGCCATTTAAGGTCACCATTAAAGCATTGGCAAGTTGAAGATAGTGTTAAGGATAAGGAAATGGTCCATGATGTTCTTCATTCAAGAACAGAACAGAATGCTCACAATCAAGATAAAATGGCTCTCATTCATCAGAAATTCATGGAAGCGAAACTTATGTCGAGAAAGTCTAAGAAATTTGAAGATGGATTCAAAGTTCTGAGCTCCAATAATGATGCCTTGATTAGGCTATTGGATTCTCAGAATCTTTATGATCTTCGTCGCTCTGCTTCGCCGGCCGAGACAGAGCTCATTACTCTGCTGAGGCCTGCAAAGACTCTTGACAACAACAACAGATCATCCAGAATGGAAAAGAAGAAAAAGAATGAAGGAATGGAAAAGAATCTCGAACACAATGTTCCGGTTCAATCTACTCGAATCGTTGTATTGAAGCCGAGTTCTGGGAAGACTAATGATCTTAAGGCAATGTACTCTCCAAAAACTTCATTACCTGAAGATGATTTCTTCGAATCAAGAAAAGTGAAAAGAGAGCTTACTTGTCAATGTGATGAAACTTTGTTTGAGTGTTCATCTAACAAATCCTATTATAATTACAAAGATAGGAGGAGTTTCAGTGATTTAGATGCTACTATGTCACAACTTCCAAGACATTCATGGGATCATAGTCTTTATTCGACGCGGTCCTTGGACCGCGTCACGTGTTCTCCAGAGTCACCAGTCTGCATAGAAGCCAAGTCAAGACTGTATGAGAGATGGATCATGATGATGACTTCCTCAAACACCAAATTTCATCACCAAGAACAGATCCATGTGAAGAGAAGATCCACCTTGGGTGAACTGCTTTCTCTTTCACAAAGAAAGAAGCATGTTACACCTAAGGTTAAGGATATTATCATTGAAGATCAAGAACCAAGAAAATCAAGAAATGAAGAATTAATGGTTAACAGTGCTCCTAAGAGCCGGCGAATTCGCCTCCGAGATGAAGTTTGTGATCATGATGCTGGCAAAGGGCATGGATCAAAGGGTATGAGATTATCATTCAAAGGAAGAGTTTCGAGTTTCTTGTTCTTAAGGAAGAAGAAATCAACTAAGGAGAAATCCAAAGATAAATCCCAATGTAGTTCTCTATATGAATCAGATTCAGTCTCTAACAGAAAACAGCAAGGCATAATTACATTAGAGCATGAATTGATTGTATCAAAGCCAGAGATTTCAAGCGAAAATCAAGATCAGCCAAGTCCAAGTTCAATTTTAGAGCCTCTATTTCAGGATGACATTCATCATGATTTCTATGACTCTATGAAGAGTGGTCACCAGGGATCATTGGTGCCATTGAAGTCCAATTTAATTGACAAATCACCACCTATAGAATCAGTATCTCGGACCCTTTCATGGGGTGATACTGATGCACATGATTCTTCCTTAGACAGCAAGGCAGAGGAACAAGAATGGCTTCTCCTTGTTGAGAAACTACTATCAGCAGCTGGACTTGATGATCAACTACAAAATGACTCCTTTGACACAAGATGGCATTCCCTTGAAAGCCCCTTGGACCCATCATTGAGGGGCAAATATGTCAATCTCAATGACAGGGAGCATCAGCATCTCAATGAGGCCAAGAGAAGGAAGATGAGATCAAGTCAGAAGCTCGTATTCGACTGCGTCAATGCGGCGATTTTGGAGCTGACTAATGGTGAGTGTGGACCAGGGAAGCACCACAAGTGCAGGGTGCACAGTAGTGGAACATGTTCCCTTTCTATGGACCACATTGTGGATCAAATGAAAGAGTTAATGGCAAGTGGAGTGAGGTGTGTTTGGGGGGATTGTGGGGACAGCAACAGCCTGGTGGTAGAAAATGTTGTCAAGAAAGAGCTTGTGGGGATTGGATGGGTTCAGCTTATGGAGTTGGAGATTGATATTTTGGGGATGGAGATTGAGAGGGATTTAATTCAAGAACTTGTGGAAAATGTTGTGGTTGATTTCACTGCCAGGGCCTCAATCAATCCCTTTTGA 2157 0.407 MLKAEENSNHKQPNVVAKLMGLDEALPRGEANLFLERKHEKCYSQHIYGHLRSPLKHWQVEDSVKDKEMVHDVLHSRTEQNAHNQDKMALIHQKFMEAKLMSRKSKKFEDGFKVLSSNNDALIRLLDSQNLYDLRRSASPAETELITLLRPAKTLDNNNRSSRMEKKKKNEGMEKNLEHNVPVQSTRIVVLKPSSGKTNDLKAMYSPKTSLPEDDFFESRKVKRELTCQCDETLFECSSNKSYYNYKDRRSFSDLDATMSQLPRHSWDHSLYSTRSLDRVTCSPESPVCIEAKSRLYERWIMMMTSSNTKFHHQEQIHVKRRSTLGELLSLSQRKKHVTPKVKDIIIEDQEPRKSRNEELMVNSAPKSRRIRLRDEVCDHDAGKGHGSKGMRLSFKGRVSSFLFLRKKKSTKEKSKDKSQCSSLYESDSVSNRKQQGIITLEHELIVSKPEISSENQDQPSPSSILEPLFQDDIHHDFYDSMKSGHQGSLVPLKSNLIDKSPPIESVSRTLSWGDTDAHDSSLDSKAEEQEWLLLVEKLLSAAGLDDQLQNDSFDTRWHSLESPLDPSLRGKYVNLNDREHQHLNEAKRRKMRSSQKLVFDCVNAAILELTNGECGPGKHHKCRVHSSGTCSLSMDHIVDQMKELMASGVRCVWGDCGDSNSLVVENVVKKELVGIGWVQLMELEIDILGMEIERDLIQELVENVVVDFTARASINPF* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1086 718 PANTHER DUF3741 FAMILY PROTEIN 236 419 - -
Ahy12g1086 718 PANTHER DUF3741 FAMILY PROTEIN 4 216 - -
Ahy12g1086 718 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 421 713 - -
Ahy12g1086 718 Pfam Domain of unknown function (DUF4378) 536 703 IPR025486 -
Ahy12g1086 718 PANTHER DUF3741 FAMILY PROTEIN 421 713 - -
Ahy12g1086 718 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 236 419 - -
Ahy12g1086 718 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 4 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1086 Ahy-Chr12 26308014 26313101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1086 10 710 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 33.452 2.69e-93 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1086 - - adu:107473982 1388.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1086 12 26308014 26313101 Ahy2g0996 2 23440264 23445408 hybridization
Ahy16g1456 16 30024346 30029912 Ahy12g1086 12 26308014 26313101 PCT
Ahy6g0027 6 454032 459596 Ahy12g1086 12 26308014 26313101 PCT
Ahy12g1086 12 26308014 26313101 Ahy16g1456 16 30024346 30029912 PCT
Ahy12g1086 12 26308014 26313101 Ahy6g0027 6 454032 459596 PCT