Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1076 ATGAGAGAGGAGGAGCCGTCACCAAACGCGTCGTCGCCGCTGGAGGAGCTTCGCTCTTCGCCGCCGCCGTGGAGGGGAAAGAGGAGATGCTCCCTCGCCAGTCACCGTCGTGCTTCCTGGAAATCGAAGTTTTACAGATTCAACAAGGAAAGGAACCGGTGGAAGGAGAGAACCGATGGTGCCGTCAAGTTCCCTAAGAACAAGTACAAGGTTTCCATTGGAGCAGCTTGTAATCTTTCTTGGCCTGCTGGCCGTCTCGTGATCCAATTATACTCAACATGCTTCATTGTTATTGCTTACTTCTTCATCAGGAGTCCACAGCAAAGGAAATACCGAGTTGGTATTGATAACCTCCTTGTGTTACTAATTGGCGAAATTCCTATTGCAATGCCAACTGTCCTTTCAGTTACAATGGCTATTGGTTCACACAAATTGTCTCAGCAGGGTGCTATAACAAAGAGAATGACTGCAATTGAAGAAATGGCCGGAATGGATGTCCTATGCAGTGATAAAACAGGCACATTAACTCTCAATAAGCTTACAGTGAACAAGAATCTAATTGAGGTCTTTGCTGATGGAGTTAATCAGGACATGGTTGTACTTATGGCTGCAAGGGCATCAAGGCTAGAGAACCAAGATGCAATTGATTGTGCAATTGTATCTATGTTAGCAGACCCAAAGAAAGAAATAGGAAGGCGTCTTGGAATGGGCTCTAACATGTATCCTTCTTCGTCGCTGCTAGGAGAAAGCAAAGATAATTTTGCTTCTGTTCCCGTCGATGATCTTATAGAGAATGCAGATGGTTTTGCTGGTGTCTTTCCTGCTTTGAAGATAGCAGACATAGGTATCGCTATAGCAGATGCAACAGATGCTACAAGAAGTGCCTCTGATATAGTTCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCTGTTTTAACTAGCCGTGCAATTTTCCAAAGAATGAAAAACTACACAGTAATCCCCCAACTACGAAAATATTAA 1005 0.4418 MREEEPSPNASSPLEELRSSPPPWRGKRRCSLASHRRASWKSKFYRFNKERNRWKERTDGAVKFPKNKYKVSIGAACNLSWPAGRLVIQLYSTCFIVIAYFFIRSPQQRKYRVGIDNLLVLLIGEIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVNKNLIEVFADGVNQDMVVLMAARASRLENQDAIDCAIVSMLADPKKEIGRRLGMGSNMYPSSSLLGESKDNFASVPVDDLIENADGFAGVFPALKIADIGIAIADATDATRSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVIPQLRKY* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1076 334 Gene3D - 304 327 - -
Ahy12g1076 334 Gene3D - 93 164 - -
Ahy12g1076 334 MobiDBLite consensus disorder prediction 1 30 - -
Ahy12g1076 334 PANTHER PLASMA MEMBRANE ATPASE 96 228 - -
Ahy12g1076 334 PANTHER PLASMA MEMBRANE ATPASE 228 274 - -
Ahy12g1076 334 PANTHER PLASMA MEMBRANE ATPASE 274 327 - -
Ahy12g1076 334 PANTHER CALCIUM-TRANSPORTING ATPASE 274 327 - -
Ahy12g1076 334 PANTHER CALCIUM-TRANSPORTING ATPASE 96 228 - -
Ahy12g1076 334 PANTHER CALCIUM-TRANSPORTING ATPASE 228 274 - -
Ahy12g1076 334 Gene3D - 180 228 IPR023299 GO:0000166
Ahy12g1076 334 SUPERFAMILY HAD-like 164 310 IPR036412 -
Ahy12g1076 334 SUPERFAMILY Calcium ATPase, transmembrane domain M 86 326 IPR023298 -
Ahy12g1076 334 ProSitePatterns E1-E2 ATPases phosphorylation site. 170 176 IPR018303 -
Ahy12g1076 334 Gene3D - 276 303 IPR023214 -
Ahy12g1076 334 Gene3D - 229 275 IPR023214 -
Ahy12g1076 334 Gene3D - 165 179 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1076 Ahy-Chr12 25552360 25555398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1076 228 327 Primary Pumps ATPases AT3G47950 65.116 1.56e-42 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1076 K01535 - ahf:112729871 619.772