Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1049 ATGGGGTCCGTTAACGACGGCATGCAACGGAAACGTGAGCCAAAGGCGGAGACCAGATGCGGCTGTGAGGTAGAGATGTGCGTCCACGTGCACTTCGAAAGTGGTAGATGGATAATATCATACTTTCAAGACGTTCACAACCACAAGTTGCTGGACGATAGACTGACTTTCATGCTATCGGGCCATAGGAAAATGGATGCAGCCACCCTGGAACAAATGAACATGATGCCTAGAGTTGGGATTAAAACGCCACAGATTTATTCATCTTTTGTGCAGACTGCCAGGGGATTCCAAAACCTTTCGTTTCTAAAGAGGGATATGTATAACCAGATAGGGAAGTATTGGAGGCTCATTGGTGGGGATGCGACGGCTTGCCTTAAGTTCCTGGAATCAACGACGCAGGCTAATCCTGGAATGTTTGTGCGTTATTTGGCGGACAAGGATGGTCGTTTGGTGCACCTGTTTTGGTCGGATAATTGCAGTCAGCTGGATTATGGTTTGTTTGGGGATGTCATGGCATTTGATGCGACATATCGGAAGAATAAGTATATGTGTCCACTGTTCCTGGACGCCATGAAGGGTAAAGCACCTGGGTGTGTGATAACAGATGGGCATAGAGCGATGAAAAAGGCAATCGAAGCGGTGTCTCCTGGGGCCTATCACCGTTTGTGTGCGTGGCATCTGCTGAGGAATGCCACTTCTAACCTAAGCAACCCCAGATTTACTTCTGAATTTAAGAAATGCATGCTGTTCGATTATAAGGTGTGGGAGTTTGAAGATCATTGGCATTATATGGTGGATGCGCTTGGTCTGTCTGATAATCAATGGGTTTCTGACCTTTACTCTAGGAGAAGGATGTGGGCAACTGCACATATAAGGGGCAACTTCTTTGGGGGTTTTCGTACAATGTCAAGGTGTGAAGGATTGCACTCAATGCTGGGTAAATTTGTCCAGTCTCGTCATAATTTGAGGGACTTTGTTGAGCAGTTTATGCGTTGCATATCCCAAATGAGGTCCAGGGAAGCACACTCTGATCTGTTATCCATGGTTGGGGAACCAGTGCTACAGAGTCCATTTCATGATTTGGAGAGGTCAGCTGCAAAGAAGCTCACAAGGGCAATTTTCTTCAACTTCAGGCCGATGCTTTTCCGCGCTTGCACATTGAAGGTACGAACACACACATGGAGCCAGACTTCTGATACATTCACTTTGTCTAGGTCAGCTAATGCGCGTAGGGAGTGGCAAGTGTGTCACTATGGTGACAGTAACAATTTCAAGTGCTCTTGCTTGCGAATGGAGTCCCTTGGTATACCGTGTGATCCCATTGTAGCAGTGCTGGTACATTTGGAGATGACTGACATACCAGACAGTCTTGTTCTGGATCATTGGTCCAAGAGTGCTCGCTCGAAAGTAAGGGCCTTTGTGGAGAAAGGTCTGTTTTGCTGGGATATCTCTGCCAACATTTAA 1467 0.4669 MGSVNDGMQRKREPKAETRCGCEVEMCVHVHFESGRWIISYFQDVHNHKLLDDRLTFMLSGHRKMDAATLEQMNMMPRVGIKTPQIYSSFVQTARGFQNLSFLKRDMYNQIGKYWRLIGGDATACLKFLESTTQANPGMFVRYLADKDGRLVHLFWSDNCSQLDYGLFGDVMAFDATYRKNKYMCPLFLDAMKGKAPGCVITDGHRAMKKAIEAVSPGAYHRLCAWHLLRNATSNLSNPRFTSEFKKCMLFDYKVWEFEDHWHYMVDALGLSDNQWVSDLYSRRRMWATAHIRGNFFGGFRTMSRCEGLHSMLGKFVQSRHNLRDFVEQFMRCISQMRSREAHSDLLSMVGEPVLQSPFHDLERSAAKKLTRAIFFNFRPMLFRACTLKVRTHTWSQTSDTFTLSRSANARREWQVCHYGDSNNFKCSCLRMESLGIPCDPIVAVLVHLEMTDIPDSLVLDHWSKSARSKVRAFVEKGLFCWDISANI* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1049 488 PANTHER OS02G0262500 PROTEIN 187 469 - -
Ahy12g1049 488 PANTHER OS02G0262500 PROTEIN 8 186 - -
Ahy12g1049 488 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 186 IPR031052 GO:0006355
Ahy12g1049 488 ProSiteProfiles Zinc finger SWIM-type profile. 402 450 IPR007527 GO:0008270
Ahy12g1049 488 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 187 469 IPR031052 GO:0006355
Ahy12g1049 488 Pfam MULE transposase domain 189 231 IPR018289 -
Ahy12g1049 488 Pfam FAR1 DNA-binding domain 8 51 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1049 Ahy-Chr12 24107879 24109445 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g1049 FAR1 2.00E-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1049 - - aip:107627027 1023.85