Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1027 ATGGAGGGTTCAGATTTTCTAAATAGTATCTCAGCTTCAATATTATCAAAACATTTCTCGGACTCTGAGATTCTATCCGACACGATCCTAGGATTGCCATTTTTGGAACTTGCTGCAATCTGCGTGAACCTTACCCTTGTTGTGTTGTTCCTCTTTGTTGTATCCGTGAGGAAGATTTGTGTGTGCGAAGGTCGGATTCGAATTAATAAGGAAAACGGCATCGCCACCAGCACCACCACCATTAATGGAAACAATGGCATTGATGGTGAAGTTCAAATAGGTTCAATGTTCAAGTTCTCAGTGTTCTCTTGTTTCTATGTCCTTTTTGTTCAAGTTGTGGTGCTTGGTTTCGATGGGGTTTCTTTGATTTCAAATGGGGCTAATGGAAAACATGTGAACTGGTTCCTTCTATTTGTGCCATCTGCACAAGGTTTGGCTTGGTTTGTGTTGAGCTTCTCAGCATTGCAATGCAAGCTCAAAGTTTCTCATAAGTTCCCTTTTCTCTTGAGGGTTTGGTGGTTATTGTCCTTTGTTATCTGTTTGTGCAATTTGTATGTTGACGTGAGAGGTCTTTATATGGAAGGTCCCAAATACCTTTCCACTCGCGTAGTTGCAAATTTCGCCGTCGCTCCGGCGCTTGCATTCTTGTCTGTGGTTGCAATTAGGGGTGTTACCGGTATACAAGTTTGTGTGGACCCTGATCTTCAGGAGCCATTGCTTGTTGAAGAGGAGACGGGTTGTCTCAAGGTTACACCTTATAAAGATGCCGGAATTTTCAGCTTGGCCACGCTTTCGTGGCTGAATCCGCTTCTTTCCGTTGGTGCAAAGAGACCCCTCGAGCTTAAGGACATTCCCCTTGTAGCGCCCAAGGATAGAGCCAAGACTAGTTATAAGATTTTGAACTCAAATTGGGAGAGATTGAAGGCTGAAAACCCCTCTAAGCAGCCTTTGTTAGCTTGGGCGATTCTCAAGTCGTTTTGGAAGGAAGCAGCCGTGAATGCCATCTTTGCAGGTCTGAATACTTTGGTAGCTTATGTTGGTCCATATATGATAAGTTACTTTGTTGATTACTTGGGTGGCATAGAGACTTTTCCTCATGAAGGCTATGTCCTCGCGGGAATATTCTTTGCTGCAAAGCTTGTGGAAACGCTGACGACTCGGCAGTGGTATCTAGGAGTGGACATCTTGGGTATGCATGTCAGATCGGCTCTAACGGCGATGGTGTACCAAAAGGGGCTAAGGCTGTCGAGCTCAGCCAAGCAAAGTCACACAAGTGGGGAGATTGTCAATTACATGGCTGTTGATGTTCAGAGGGTAGGGGATTACTCTTGGTATCTTCACGACATGTGGATGCTTCCGATGCAGATTGTTCTTGCTCTTCTAATTTTGTACAAGAGTGTTGGAATAGCTGCCATTGCAACATTGATTGCTACAATAATTTCCATTGTTGTAACTGTTCCTGTGGCTAGAATACAAGAAAATTACCAAGATAAATTGATGGCTGCTAAGGATGAAAGGATGAGAAAGACATCAGAGAGTTTAAGGAATATGAGGATTCTCAAGCTACAAGCTTGGGAAGACAGGTATCGTATACAATTGGAGGAAATGCGTGGAACGGAATACAAGTGGCTGAGGAAAGCGCTCTATTCTCAGGCTTTCATAACCTTCATATTCTGGAGCTCCCCGATTTTTGTGTCGGCAGTCACTTTTGCTACTTGCATATTGTTGGGTGGTCAGCTGACAGCAGGCGGTGTCCTTTCTGCCCTGGCTACATTTCGGATCCTCCAAGAACCTCTGAGAAACTTTCCGGACTTGGTGTCAACGATGGCTCAGACAAAAGTTTCGCTTGATCGGATAACTAGTTTTCTGCAGGACGAAGAATTGCAGGAAGATGCAACTATCGTCTTGCCACCAGGCATGACTGACACTGCCGTAGAGATCAAGGATGGTGTCTTCTGCTGGGACCCTTCTTTGTCTAGGCCTACACTGTCAGGAATACATATGAAAGTCGAAAAGGGCATGCGTGTGGCTGTTTGTGGCATGGTTGGTTCTGGGAAATCAAGCTTCCTTTCTTGCATCCTTGGAGAGATTCCTAAGCTTTCGGGTGAAGTTAAAGTATGTGGCACTGCTGCATATGTCTCCCAATCAGCATGGATACAGACAGGAAATATAGAAGAAAATATCCTCTTTGGAAATGCGATGGACAAACCAAGGTACAAGAAGGTTATTCATGCTTGTTCACTGAAGAAGGACCTAGAGCTTTTCTCACATGGAGACCAAACAATTATCGGTGATAGAGGTATAAACCTCAGTGGTGGCCAGAAGCAGCGGGTTCAGCTTGCACGAGCACTTTATCAAGATGCTGATATTTATCTCCTTGATGATCCCTTTAGTGCAGTTGATGCCCACACCGGATCGGATTTGTTCAGGGAGTATGTATTGACAGCATTAGCCAAAAAAACAGTCATTTTTGTGACGCATCAAGTTGAATTTCTGCCTGCTGCTGATCTGATACTGGTCCTTAAAGAAGGACAAATCATACAGGCCGGAAAATATGATGAGCTTCTACAAGCTGGAACAGATTTTAAGACTCTAGTTTCAGCTCATCATGAAGCAATAGAGGCTATGGATATTCCTTCTCACTCAGATGAATCAGATGAAAACATGTCCCCAGATAGATCTATTATGACAGAAAAGAGATCCTCTGCTTCACTCGACATTGATGGTCTAGCAAAGGAAGTGCAAGAGGGATCATCCGATCAGAAGGCAATCAAGGAGAAAAAGGCAAAGCGCTCAAGGAAAAAACAACTTGTTCAAGAAGAGGAGAGGGTTAGAGGTCGTGTGAACATGAAGGTTTACTTGTCGTACATGGCTGCAGCATATAAAGGCTTATTGATTCCGCTCATAATTATGGCACAATCATTATTTCAGTTCCTTCAGATTGCTAGTAACTGGTGGATGGCTTGGGCAAATCCTCAAACTGCTGGAGACGAGCCAAAAGTAACTCCAACTGAGCTTCTTCTCGTGTACATGGCCCTTGCTTTTGGCAGCTCATTGTTCATATTTGTAAGGGCTGTTCTGGTAGCTACATTTGGTCTTGCTGCTGCGCAAAAATTATTTTTCAGCATGCTCAGAAGTATTTTCCGTGCACCAATGTCTTTCTTTGACTCTACACCATCTGGAAGGGTCCTGAATCGGGTTTCTGTTGATCAAAGTGTTGTGGATCTCGACATTCCTTTTCGACTTGGAGGGTTTGCTTCAACAACAATACAGCTCATAGGAATTGTTGCTGTAATGACAACAGTTACATGGCAAGTTTTGCTCCTGGTTATCCCAATGGCTATTGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCCTCAAGGGAACTGGTACGAATTGTAAGCATCCAAAAATCTCCAATAATACATCTTTTCGGTGAATCAATTGCGGGAGCAGCCACCATCAGAGGTTTTGGACAAGAAAAAAGGTTCATGAAGAGGAACCTTTACCTTTTGGATTGTTTTGCACGGCCATTCTTTTGCAGCCTTGCAGCTATTGAGTGGCTATGCTTGCGCATGGAATTACTCTCCACTTTTGTGTTTGCTTTCTGTATGGTACTACTTGTAAGTGTTCCCCATGGAAGTATTGACCCCAGCATGGCTGGACTTGCCGTGACGTATGGCCTGAATTTGAATGGACGTCTATCTCGGTGGATACTTAGCTTTTGCAAACTTGAAAACAAAATTATATCTATCGAAAGGATTTATCAGTACAGCCAAGTTCCTAGTGAAGCACCTGCAATTGTTGATGATTCTCGTCCTCCGTCCTCATGGCCCGAGAATGGAACAATCCAAATAGTTGATTTGAAGATACGATACAAGGAAAATCTTCCATTGGTGCTTCGTGGAATATCATGTACATTTCCTGGTGGGAAGAAGATTGGAATAGTCGGACGTACTGGCAGTGGCAAATCTACTTTGATTCAGGCATTATTTCGATTGGTTGAACCATCCACGGGGAGTATCATTATTGACAACATCAATATTTCAACAATTGGCCTCCATGACCTTCGAAGCCGTCTGAGTATAATACCACAAGATCCAACCTTATTTGAAGGCACAATACGAGGCAATCTTGATCCTCTTGAGGAGCACTCAGATAAAGCGATTTGGGAGGCACTGGATAAGTCTCAGCTTGGAGAGGTTATTCGATCAAAAGGACAAAAGCTTGATACGCCGGTTCTAGAAAATGGAGATAATTGGAGTGTAGGGCAACGACAACTTGTTGCTCTAGGCCGAGCCCTACTTAAACAGTCAAAGATACTTGTACTTGATGAAGCAACGGCATCGGTTGATTCTGCTACTGATAATCTTATCCAAAAGATTATTCGAGAAGAGTTCAGAGACTGCACTGTTTGTACTATTGCACATCGTATTCCTACAGTTATTGACAGTGATCTAGTTCTGGTTCTCAGTGATGGCCGGGTCACAGAATTTGACACTCCATCACGGCTATTAGAGGATAGGTCATCCATGTTCCTAAAGTTGGTAAGTGAGTATTCATCACGGTCGAGTGGCATACCAGATTTTTAA 4596 0.4354 MEGSDFLNSISASILSKHFSDSEILSDTILGLPFLELAAICVNLTLVVLFLFVVSVRKICVCEGRIRINKENGIATSTTTINGNNGIDGEVQIGSMFKFSVFSCFYVLFVQVVVLGFDGVSLISNGANGKHVNWFLLFVPSAQGLAWFVLSFSALQCKLKVSHKFPFLLRVWWLLSFVICLCNLYVDVRGLYMEGPKYLSTRVVANFAVAPALAFLSVVAIRGVTGIQVCVDPDLQEPLLVEEETGCLKVTPYKDAGIFSLATLSWLNPLLSVGAKRPLELKDIPLVAPKDRAKTSYKILNSNWERLKAENPSKQPLLAWAILKSFWKEAAVNAIFAGLNTLVAYVGPYMISYFVDYLGGIETFPHEGYVLAGIFFAAKLVETLTTRQWYLGVDILGMHVRSALTAMVYQKGLRLSSSAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDMWMLPMQIVLALLILYKSVGIAAIATLIATIISIVVTVPVARIQENYQDKLMAAKDERMRKTSESLRNMRILKLQAWEDRYRIQLEEMRGTEYKWLRKALYSQAFITFIFWSSPIFVSAVTFATCILLGGQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRITSFLQDEELQEDATIVLPPGMTDTAVEIKDGVFCWDPSLSRPTLSGIHMKVEKGMRVAVCGMVGSGKSSFLSCILGEIPKLSGEVKVCGTAAYVSQSAWIQTGNIEENILFGNAMDKPRYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSDLFREYVLTALAKKTVIFVTHQVEFLPAADLILVLKEGQIIQAGKYDELLQAGTDFKTLVSAHHEAIEAMDIPSHSDESDENMSPDRSIMTEKRSSASLDIDGLAKEVQEGSSDQKAIKEKKAKRSRKKQLVQEEERVRGRVNMKVYLSYMAAAYKGLLIPLIIMAQSLFQFLQIASNWWMAWANPQTAGDEPKVTPTELLLVYMALAFGSSLFIFVRAVLVATFGLAAAQKLFFSMLRSIFRAPMSFFDSTPSGRVLNRVSVDQSVVDLDIPFRLGGFASTTIQLIGIVAVMTTVTWQVLLLVIPMAIACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGAATIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSVPHGSIDPSMAGLAVTYGLNLNGRLSRWILSFCKLENKIISIERIYQYSQVPSEAPAIVDDSRPPSSWPENGTIQIVDLKIRYKENLPLVLRGISCTFPGGKKIGIVGRTGSGKSTLIQALFRLVEPSTGSIIIDNINISTIGLHDLRSRLSIIPQDPTLFEGTIRGNLDPLEEHSDKAIWEALDKSQLGEVIRSKGQKLDTPVLENGDNWSVGQRQLVALGRALLKQSKILVLDEATASVDSATDNLIQKIIREEFRDCTVCTIAHRIPTVIDSDLVLVLSDGRVTEFDTPSRLLEDRSSMFLKLVSEYSSRSSGIPDF* 1532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1027 1531 SMART AAA_5 672 853 IPR003593 -
Ahy12g1027 1531 SMART AAA_5 1311 1496 IPR003593 -
Ahy12g1027 1531 Coils Coil 492 512 - -
Ahy12g1027 1531 MobiDBLite consensus disorder prediction 877 894 - -
Ahy12g1027 1531 CDD ABC_6TM_ABCC_D1 332 619 IPR044746 GO:0140359
Ahy12g1027 1531 ProSitePatterns ABC transporters family signature. 770 784 IPR017871 GO:0005524
Ahy12g1027 1531 Pfam ABC transporter 663 797 IPR003439 GO:0005524
Ahy12g1027 1531 MobiDBLite consensus disorder prediction 916 938 - -
Ahy12g1027 1531 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1285 1519 IPR003439 GO:0005524
Ahy12g1027 1531 CDD ABCC_MRP_domain2 1283 1503 - -
Ahy12g1027 1531 Gene3D - 1268 1520 IPR027417 -
Ahy12g1027 1531 SUPERFAMILY ABC transporter transmembrane region 965 1271 IPR036640 GO:0005524|GO:0016021
Ahy12g1027 1531 Gene3D ABC transporter type 1, transmembrane domain 927 1266 IPR036640 GO:0005524|GO:0016021
Ahy12g1027 1531 Gene3D ABC transporter type 1, transmembrane domain 303 628 IPR036640 GO:0005524|GO:0016021
Ahy12g1027 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 640 867 IPR027417 -
Ahy12g1027 1531 MobiDBLite consensus disorder prediction 877 901 - -
Ahy12g1027 1531 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 87 1531 - -
Ahy12g1027 1531 CDD ABC_6TM_ABCC_D2 966 1260 IPR044726 GO:0140359
Ahy12g1027 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1276 1516 IPR027417 -
Ahy12g1027 1531 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 87 1531 - -
Ahy12g1027 1531 SUPERFAMILY ABC transporter transmembrane region 320 630 IPR036640 GO:0005524|GO:0016021
Ahy12g1027 1531 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 334 611 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy12g1027 1531 Gene3D - 639 873 IPR027417 -
Ahy12g1027 1531 Coils Coil 924 944 - -
Ahy12g1027 1531 Pfam ABC transporter transmembrane region 977 1208 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy12g1027 1531 Pfam ABC transporter transmembrane region 335 599 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy12g1027 1531 Pfam ABC transporter 1302 1450 IPR003439 GO:0005524
Ahy12g1027 1531 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 645 868 IPR003439 GO:0005524
Ahy12g1027 1531 CDD ABCC_MRP_domain1 645 845 - -
Ahy12g1027 1531 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 968 1238 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1027 Ahy-Chr12 23206739 23214687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1027 616 861 Calmodulin-binding Proteins AT2G36910 30.943 4.95e-20 95.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1027 12 23206739 23214687 Ahy12g1027 12 23206739 23214687 ECH
Ahy12g1027 12 23206739 23214687 Ahy2g0940 2 20264377 20272304 hybridization
Ahy16g1414 16 28956916 28964452 Ahy12g1027 12 23206739 23214687 PCT
Ahy6g0055 6 803728 811884 Ahy12g1027 12 23206739 23214687 PCT
Ahy12g1027 12 23206739 23214687 Ahy16g1414 16 28956916 28964452 PCT
Ahy12g1027 12 23206739 23214687 Ahy6g0055 6 803728 811884 PCT