Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1009 ATGGGTTTGCTTCGAGGCATGTGTTGTTTCTCTAAGTCAAATATCTCAATAGAAACAAAACCTTCTAATCCAACCCTCACCTCAACAAAACAACTCTTTTCAAATCAAAGACTTGTCTCAACAAAACAACCATCATCCATAATAAAAGAACTTTGCCACCACTTTTCACTTGCTGAGTTACAATCATCAACAAATAACTTCAACCATTCTTCCATAATCGGAGAAGGCGGATTTGGCGTTGTTTACAAAGGTCATTTGAAGCAAAATTCCGCCGCAGTCGCCGTCAAGCGATGCAAAAAAGAATCAATCTTCGGTTTCTCAGAGTTTAAGAACGAGGTTGTCTTGCTCTCACAGCTACACCACCCTAATCTCATGTCATTAGTTGGATTTTGTGTCGAAAGAAACGAGTTAGTTCTTGTTTATGAATACATGTCTAATGGTTCCCTTTTTGATCATATTCATCCTAATAAAATTATAAGGGATCCACTCCCATGGAAACTTAGGCTTAAGATTTGCATTGGAGTAGCGCGTGGACTACACTATCTTCACACAGGACTCAAGTATGCAATCATACACCGTCACATTAAATCGCGCAACATTGTTTTAGATCATAACTGGGAACCGAAAATTTCGGGGTTGTTCTTGTCCAAAAGAGGTCCATATAGCATGTCAAAATCATTGATTAGAGTTAATTCGAGAGTAATGTCAACATGTGGATATAGTGATCCAGAATATGCAGCAACCGGTGATTTAACTGAAAAATCGGATGTGTATTCATTTGGTATAGTTCTATTAGAAGTTTTTAGTGCTAAGTCAGCAATGGATCTTATTAAGGAACATTTGAAACATAAGTATTTGGTGAAGTCATATGCAGAGGAAATTGTTGATCCGTTTCTGAAGTCAAAGATTGATCCAAGTTGTTGGAATTTGTTTGTTGACATTGCTCATCGATGTTTGGTTGTTGATGGAAGAGAGAGGCCAGATATGGGTGAAGTGGAAGTGGAGCTTGAACATGCATTGCAATTGCAAGAGGAAGCTGACTCCAAATATGAGCCGAATGCCAATTCCTAA 1071 0.3828 MGLLRGMCCFSKSNISIETKPSNPTLTSTKQLFSNQRLVSTKQPSSIIKELCHHFSLAELQSSTNNFNHSSIIGEGGFGVVYKGHLKQNSAAVAVKRCKKESIFGFSEFKNEVVLLSQLHHPNLMSLVGFCVERNELVLVYEYMSNGSLFDHIHPNKIIRDPLPWKLRLKICIGVARGLHYLHTGLKYAIIHRHIKSRNIVLDHNWEPKISGLFLSKRGPYSMSKSLIRVNSRVMSTCGYSDPEYAATGDLTEKSDVYSFGIVLLEVFSAKSAMDLIKEHLKHKYLVKSYAEEIVDPFLKSKIDPSCWNLFVDIAHRCLVVDGRERPDMGEVEVELEHALQLQEEADSKYEPNANS* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1009 356 Gene3D Transferase(Phosphotransferase) domain 1 144 355 - -
Ahy12g1009 356 SUPERFAMILY Protein kinase-like (PK-like) 35 332 IPR011009 -
Ahy12g1009 356 Gene3D Phosphorylase Kinase; domain 1 27 143 - -
Ahy12g1009 356 Pfam Protein tyrosine and serine/threonine kinase 70 334 IPR001245 GO:0004672|GO:0006468
Ahy12g1009 356 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 35 352 - -
Ahy12g1009 356 PANTHER OS07G0166700 PROTEIN 35 352 IPR045272 GO:0004714|GO:0006468
Ahy12g1009 356 ProSiteProfiles Protein kinase domain profile. 67 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g1009 356 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1009 Ahy-Chr12 22757462 22758532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1009 45 347 Receptor kinase-like Gene Family AT3G51550 46.452 6.43e-88 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Ahy12g1009 PK_Tyr_Ser-Thr 1.00E-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1009 - - adu:107473893 681.789