Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1007 ATGGCACCACCGAATGCAAATGTGAAAGCGGCCTATCGTGCTATGGCAGGTCTTGGGATTTCTGAATCACAAGTGAAACCAGTACTAAAGAAGCTCCTTAAATTGTATGATAAAAATTGGGCACTTATTGAAGAAGAGAATTATAGAGCTCTGGCAGATGCCATATTTGAGCCTGATGACGAAAATCAGGTCCCAGACCAGAAAAGGGTTCCAGAACAGAAAAAGAAAAAGAAGAAAGTTAACGAAGAAGAGATGGAGAACGAAGAAGAAGCTGAGATGAATTTGGAGTCAGCCCGCCCTTTGAAGAGAGTGCGTCTAAGAGGCCAAGAGAGTCAGTCTTTGCATCCTACAGCTAGCTGTTCCCCCACACTTGCCACCTCCCCATCAAAACAATCTGACACATCTGGTGGAAATTTGAGAACTGAAGTGCACCCAGCTCCAACGCAAGATGTTATTGTTGGCAAGGGAAAACAACCCGTGTCACCCGATCTTAATCCCAGAAGAAGGAGATTGATATCTGAATCCGAAAGAGCATCCCAATCAGTCCCTTCTAAAGATCCAACAGCCAAACCAGCTGGAAAGCAAAATGGTCATGTCAATATGGCATCATCACAATGCACAGCTGGAGACTCAAATGAAAGAGCTACATCTAGTATAGAGATAGCCTCGTCTACTAAGGGAGAGGTAAAAATTTCTCTGAGCTGCAGCTCAGCTGTTGGGGGACCAGATTTTCATATGCCTAGTCAAGATCAAATTCTAAAAATGATGGAGGATAAATGTCTGCATTCATATAAAATCACTGACCCGAATTTTTCTGTTCCGAAACTGTTGAAAGATATATGTGACTGTGTCCTGGAATTCAAAATCTATTCAGATGGTTCCCAGGAAGGAGCTCTCATAAGATCAAGGGACGATATGTTAAAGGAATCTGAGACACATGGCACACTGAGTGTCACAAGAAATAAGGATTTGGATGTGCTTTCTCTTCCACCAAGTGGAACAATTCATGTTGAGTCTTCTGCCACCTTGCCATCTCCCCGAAATCCCTTTTCTCTTGCCAACCACACTGGTCAGGTTGATGCTGTACTGGTTTCCAGGGATGCTATACATCATTTGTCAGAAAATGATGATGGAATGGAGTTGGAGGATCCTACTTCCTCAAATTCACGCAGTTTAGTGGTTGTTCCACAGCATGAACTTACAGCTGATGATATACGGTCGATTCACGATGTTAATGACCTCACAAAAGCAGAGGAAAGTGTTCAAATTTCATGGGTCAATGAAGTTACTAAGGATTTCCTGCCTCCTTTTCACTACATACCCCAAAACCTTGTGTTCCAAAATGCTTCTGTGAACATTTTGCTATCTCGTATTGGGGATGAGGACTGTTGCTCATCTTGTGTGGGAAATTGTGTCTCATCACCTACACCCTGTGCTTGTGCAAACAAAAATGGAGGGGAATTTGCATATAATGCACGAGGCCTATTGAAGGAAGGCTTTTTGGAAGGGTGCATTGCCATCAGCCGTAACCCTAAACGATATTACGTCTTTTGCAAAGACTGCCCAATTGAAAGATCTAAGAATGATGATTGTTTAGAACCATGTAAAGGACACTTGAAGAGGAAATTTATTAAAGAATGTTGGAGCAAATGTGGCTGTGGGAAACAGTGTGGCAATCGGATTGTTCAGCGTGGAATAACTTGCAATCTGCAGGTATTTTTCACTCCGGAAGGAAAAGGATGGGGTCTTCGTACTTTAGAAGAGCTGCCAAAAGGTGCATTTGTGTGCGAATTTGTTGGAGAGATATTAACTATTAAAGAGTTGCATGAGAGGAACATGAAACATGCTGTAACTGGGGAATATACATACCCGGTTCTACTGGATGCAGATTGGGGTTCAAGATTTGTGAAGGATGAAGAAGCTCTAAGCTTGGATGCTGCTTCCTTTGGTAATGCTGCTAGGTTTATCAATCACAGGTGTTATGATTCTAACTTGGTTGAGATCCCTGTTGAAATTGAAGTCCCAGGGCATTACTACTATCATTTTGCCTTGTTCACTTGCAGAAAAGTAGCAGCAAAGGAAGAGCTCACTTGGGACTATGGCATTGACTTTGATGACCATGATAATCCTATCAAGCCGTTCCAGTGCAAATGTGGAAGTAAATTCTGTAGGAATATGAAGCGTTCAAATAGGTCTGTGAGGTCTTCACCATCAAATGCAAGATGTTCTCTTTGA 2235 0.4237 MAPPNANVKAAYRAMAGLGISESQVKPVLKKLLKLYDKNWALIEEENYRALADAIFEPDDENQVPDQKRVPEQKKKKKKVNEEEMENEEEAEMNLESARPLKRVRLRGQESQSLHPTASCSPTLATSPSKQSDTSGGNLRTEVHPAPTQDVIVGKGKQPVSPDLNPRRRRLISESERASQSVPSKDPTAKPAGKQNGHVNMASSQCTAGDSNERATSSIEIASSTKGEVKISLSCSSAVGGPDFHMPSQDQILKMMEDKCLHSYKITDPNFSVPKLLKDICDCVLEFKIYSDGSQEGALIRSRDDMLKESETHGTLSVTRNKDLDVLSLPPSGTIHVESSATLPSPRNPFSLANHTGQVDAVLVSRDAIHHLSENDDGMELEDPTSSNSRSLVVVPQHELTADDIRSIHDVNDLTKAEESVQISWVNEVTKDFLPPFHYIPQNLVFQNASVNILLSRIGDEDCCSSCVGNCVSSPTPCACANKNGGEFAYNARGLLKEGFLEGCIAISRNPKRYYVFCKDCPIERSKNDDCLEPCKGHLKRKFIKECWSKCGCGKQCGNRIVQRGITCNLQVFFTPEGKGWGLRTLEELPKGAFVCEFVGEILTIKELHERNMKHAVTGEYTYPVLLDADWGSRFVKDEEALSLDAASFGNAARFINHRCYDSNLVEIPVEIEVPGHYYYHFALFTCRKVAAKEELTWDYGIDFDDHDNPIKPFQCKCGSKFCRNMKRSNRSVRSSPSNARCSL* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1007 744 Pfam Ubiquitin-binding WIYLD domain 8 61 IPR018848 GO:0018024
Ahy12g1007 744 Pfam Pre-SET motif 415 560 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy12g1007 744 ProSiteProfiles Pre-SET domain profile. 463 565 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy12g1007 744 Gene3D - 1 61 IPR043017 -
Ahy12g1007 744 Pfam SET domain 580 701 IPR001214 GO:0005515
Ahy12g1007 744 MobiDBLite consensus disorder prediction 110 142 - -
Ahy12g1007 744 MobiDBLite consensus disorder prediction 197 215 - -
Ahy12g1007 744 Gene3D SET domain 397 709 IPR046341 -
Ahy12g1007 744 SMART preset_2 411 552 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy12g1007 744 Coils Coil 74 98 - -
Ahy12g1007 744 MobiDBLite consensus disorder prediction 57 84 - -
Ahy12g1007 744 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 4 187 - -
Ahy12g1007 744 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 194 734 - -
Ahy12g1007 744 MobiDBLite consensus disorder prediction 92 109 - -
Ahy12g1007 744 SMART set_7 568 707 IPR001214 GO:0005515
Ahy12g1007 744 ProSiteProfiles SET domain profile. 568 701 IPR001214 GO:0005515
Ahy12g1007 744 CDD SET_SETDB-like 435 701 - -
Ahy12g1007 744 MobiDBLite consensus disorder prediction 57 215 - -
Ahy12g1007 744 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 4 187 - -
Ahy12g1007 744 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 194 734 - -
Ahy12g1007 744 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 740 IPR025776 -
Ahy12g1007 744 SUPERFAMILY SET domain 421 724 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1007 Ahy-Chr12 22720928 22730597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1007 413 724 Su(var)3-9 homologs AT1G73100 29.787 2.01e-28 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy12g1007 Pre-SET 4.60E-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1007 - - gmx:100787369 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1007 12 22720928 22730597 Ahy12g1007 12 22720928 22730597 ECH
Ahy12g1007 12 22720928 22730597 Ahy9g1322 9 45815611 45827071 hybridization
Ahy16g1105 16 20023808 20034285 Ahy12g1007 12 22720928 22730597 PCT
Ahy6g0287 6 3572791 3580999 Ahy12g1007 12 22720928 22730597 PCT
Ahy12g1007 12 22720928 22730597 Ahy16g1403 16 28327607 28335305 PCT
Ahy12g1007 12 22720928 22730597 Ahy6g0064 6 941375 949266 PCT