Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1006 ATGATGCCGTGTTATGCCCCTTCTTTCTGTCCCTACCTGGTAACTCCACCGTCCACCTCCGTCCACGGCGGTTCCCATCACCGGAGACCGACCAAACGCAACGTCACCATCCTCTACCCAAAAATGTCCCTAAACAACAACAACAATAACACATCAAACCCTAACCCCTCTTCCTTGCTGACGTCGCTTACCAAACTTCTCTGGGGACAATCACTTCCGCCGGGCCTCCTAGTTTCCACCGCGCGTGCCACGTGGAATGCCACGTGGCGCCTCATGATGTCACAGCTCGCTCCCTCCGACCCTTCAGGCGGTTACGCCAGGCCGGCCTCCAAGTTCCGCTTACCACAGAAGAACATCTCAAGCCCAACGAGCCTGCACCTTTACGTGGCCCTTCCATGCCCGTGGGCCCACCGGACACTTATAGTCCGGGCCCTCAAGGGCCTTGAGGACGCCGTCCCGGTTTCTGTAGCATCCCCAGGCCAGGACGGGTCGTGGGAGTTCAAACAGGCCAATGGTCCGGGCTTAAGCCCGGGATTGGACAAGGCAAACAGGTGTAGAACGTTGAGGGAAGTTTATGGGATGAGAAAAGGTGGGTATGATGGGAGGGCCACGGTGCCTATGCTGTGGGACAAGGATTCGAAGGAGGTTTTGTGCAATGAGAGTTATGACATAATTGAATTTTTCAATTCCGGGTTGAACGGGTTGGCCCACAACCCGGGTTTGGATCTATCGCCTTCTGAGTTGAAGGGGAAGATTGAGGAATGGTATAGCGTGATATACCCAAATGTGAACAATGGTGTTTACAGATGTGGATTTGCACAGACACAAGAAGCTTATGACAGAGCAGTGAATGAGTTGTTTGGAACATTAGACAAGTTGGAGGATCACTTGACCACTTCCCGCTACTTATGTGGAGAAAAATTGACCCTTGTAGATATATGTCTGTTTACCACTCTAATTCGGTTTGATGTTGCATACAATGTTCTTTTTAAGTGTACCAAGAAGAAGTTATGTGAGTATCCAAATCTACATGCCTACATGCGTGACATTTATCAGATGCCTAAAGTTGCAGAAACCTGCAATTTTTCTGAAATCATGGATGGTTATTACAAAATACTTTTCCCTCTAAATCCAGGGAGCATAAGACCAATCATGCCTTCAACTTCTGAGCATGAAATCCTTTGCAGACCTCATGGTAGGGAGTCTCTATCAGCAGCTTTACCCGTCTTTGTTAAATAG 1239 0.4923 MMPCYAPSFCPYLVTPPSTSVHGGSHHRRPTKRNVTILYPKMSLNNNNNNTSNPNPSSLLTSLTKLLWGQSLPPGLLVSTARATWNATWRLMMSQLAPSDPSGGYARPASKFRLPQKNISSPTSLHLYVALPCPWAHRTLIVRALKGLEDAVPVSVASPGQDGSWEFKQANGPGLSPGLDKANRCRTLREVYGMRKGGYDGRATVPMLWDKDSKEVLCNESYDIIEFFNSGLNGLAHNPGLDLSPSELKGKIEEWYSVIYPNVNNGVYRCGFAQTQEAYDRAVNELFGTLDKLEDHLTTSRYLCGEKLTLVDICLFTTLIRFDVAYNVLFKCTKKKLCEYPNLHAYMRDIYQMPKVAETCNFSEIMDGYYKILFPLNPGSIRPIMPSTSEHEILCRPHGRESLSAALPVFVK* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1006 412 PANTHER GLUTATHIONE S-TRANSFERASE C-TERMINAL DOMAIN-CONTAINING PROTEIN-LIKE 44 406 - -
Ahy12g1006 412 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 218 387 IPR010987 -
Ahy12g1006 412 Pfam Glutathione S-transferase, N-terminal domain 133 229 IPR004045 -
Ahy12g1006 412 CDD GST_C_Omega_like 245 386 - -
Ahy12g1006 412 Pfam Glutathione S-transferase, C-terminal domain 276 348 - -
Ahy12g1006 412 PANTHER GLUTATHIONYL-HYDROQUINONE REDUCTASE 44 406 IPR016639 GO:0004364
Ahy12g1006 412 SUPERFAMILY Thioredoxin-like 122 230 IPR036249 -
Ahy12g1006 412 SUPERFAMILY GST C-terminal domain-like 237 374 IPR036282 -
Ahy12g1006 412 SFLD Xi.1 95 402 IPR016639 GO:0004364
Ahy12g1006 412 Gene3D - 252 409 - -
Ahy12g1006 412 SFLD Xi (cytGST) 95 402 - -
Ahy12g1006 412 Gene3D Glutaredoxin 90 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1006 Ahy-Chr12 22718728 22720550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1006 113 371 Glutathione S-transferase Gene Family AT5G02780 23.396 1.31e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1006 K07393 - gmx:100812499 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1006 12 22718728 22720550 Ahy12g1006 12 22718728 22720550 ECH
Ahy12g1006 12 22718728 22720550 Ahy2g0918 2 19334798 19336631 hybridization