Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1002 ATGGAAGAACAGAATATATCATTACTTTCTCCACTATCACCACTGCCACCACCATCTTTATTGTCTATACCCACTACCATCACCCAAGATTTCAGCTTTTTCAATGATACCTTCTTTGAAAAGCCACTTTCTGGCTTGGTAAACGTTGGAGACTTTGGTCCTTCCTTATATGAGTGGTTAGACATCGTAGAAGAAGATGCCCCGCCAACTGAAACGCCAATAAAGCATCCTCTTCCATCGTTGTCTCCATACGTACTTATTCTAGAATCTTCTGAAGTAGTTGCACAGTCACAAAATCCAGTCCTTTCCATAATTCCATCCAATCTTGAGGTGGTCGTTTCTAACAATAACTTCACCAACAACAGAGTTGGAGGGTGGTTGAAACTTCGAGCATCAACGATGGCATTGGTTGCTGATACCATGAGCATGAACAACAAAAGGAATAAAAATAATCTTTCGAAAATTACTTACTTGACAGAGAGCGAGTCTGAAAACCTCGAAGATGGTTATAAATGGCGTAAGTACGGCAAAAAATCACTCAAAAAGAGCCCTTTCCCAAGAAGCTACTATCGTTGCACTGCAATTGGTTGCAATACGAAGAAGCGCTCCACCGTTAGCCCCAAATTTAGTAGAGGAAGCGGTGTACAGAAACCTGTACTTTCAGATGCAAGTGCAGGTGCAAGGGAAAGAAAGCATGCCAATAACATTATTACTTGTGTTAATGTTAGAACTGATAGTGATAGTTGTGTTAATGACGTTGGCTCGATTGAGGATATTGGTACCGGACTGCTTGAGGATATTTTAATTTGTCATCAATAG 819 0.4066 MEEQNISLLSPLSPLPPPSLLSIPTTITQDFSFFNDTFFEKPLSGLVNVGDFGPSLYEWLDIVEEDAPPTETPIKHPLPSLSPYVLILESSEVVAQSQNPVLSIIPSNLEVVVSNNNFTNNRVGGWLKLRASTMALVADTMSMNNKRNKNNLSKITYLTESESENLEDGYKWRKYGKKSLKKSPFPRSYYRCTAIGCNTKKRSTVSPKFSRGSGVQKPVLSDASAGARERKHANNIITCVNVRTDSDSCVNDVGSIEDIGTGLLEDILICHQ* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1002 272 Pfam WRKY DNA -binding domain 167 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy12g1002 272 Gene3D WRKY domain 153 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy12g1002 272 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 133 202 - -
Ahy12g1002 272 MobiDBLite consensus disorder prediction 206 226 - -
Ahy12g1002 272 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 133 202 IPR044810 GO:0003700
Ahy12g1002 272 SUPERFAMILY WRKY DNA-binding domain 161 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy12g1002 272 SMART WRKY_cls 166 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy12g1002 272 ProSiteProfiles WRKY domain profile. 161 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1002 Ahy-Chr12 22214247 22217279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1002 144 202 WRKY Transcription Factor Family AT2G47260 57.627 1.27e-19 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy12g1002 WRKY 1.60E-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1002 - - aip:107627000 522.702