Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0989 ATGACAACAAGTCTGCATCAGGCATCAATAGCTGAAAGCAATTTGCAAATAATGGAAGCCCGTCCTTCTATATCCATTGAAAGATCAAGTGCGGAGGAACTCAATGTCATGGGGATGTCTGGAGTACTATCTTCATCCTTGGCAGTCCTTCCAACACCCCTAGAAGAGACATATAATAAGTTGCCTGATTCACCTCTTGCTTTTGTAGAAGAAGGGCTGATGAGTAGACCTTTAACTCATTCCGGTCATTTAAATAACAACGGAGCAGTTGGACATATCTTTTCATCTTCTCCTGGATATTCAACTGCTCTTCACCATTCATCCCTTTCACCTCATGAAAAGCATTCTAGAAATGCTCACATTATTTCACATTCATCAACTAACATGGCTACATTGCCACCATTTTCTTCAAATAGTGGACCACTACCTTCCAAACCATCAAGCCATTTTCCTAATGAAAACAGTGCCTCCTGGCATACTGATTCTGTGCCAAGCTTTCTGGATTTTCCTGCAAATACTTCCATCGATAGTGGTAGGGTAGAAAGTGGTGCCTGCACTATCATGACATCTGAGGAATATTGTAAGCAAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGATGATACTTTAACTTCTAATTTGAATGACCTTCTTGCTGATAATGTTCCAGATCCTGAGCCAAAGGAGCCATTCCAGGTTTCAAAACCATCTTTGCAATTACCAGGACATCCATCCGAAGGCCATCAACAACTTCCTGCTTCATCTGAAGAAAATTGCGCTGGTGCTGCCCCTTCTTTCTCAGCAAAATCTGCTCCTTCCAAGCCACGAATGCGTTGGACTCCCGAACTTCATGAGGCCTTCGTGGATGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACTCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGCTTAACTATATATCATGTCAAAAGCCACTTGCAGAAATACAGGACAGCTAGATATAGACCCGACTCATCTGAAGGAGTCTCAGAGAAAAAAACAAGTTCCATTGAAGAGATGTCATCACTAGATTTGAAAACTGGCATTGATATCACTGAAGCTCTGCGACTGCAAATGGTGGTTCAGAAGCAGTTGCATGAACAACTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAACAAGGAAGGTACCTCCAGATGATGTTTGAGAAGCAATGTAAACCCGAGACTGAAATGTTTAAGGCATCATTATCTACTGCTGAAAATCCATCTGGATCCTCTTTGGATGCCATGCAAGATGTTCCAGCCAAAAGCGCATCAATGGTGGACAGTTACAAGCCAGGACCTGATCAAGCTATCGGCAGCACCACAGTTGTGGAAGGCTCAGTGGAAATAAGAGGGAAACATGATTCTCCCAAAACACAACTTTCTGAGAATCCTAAGCAGCATGCTAATGCTAACGACGATGCTGCTCAAGCCTCGAAGCGTCAAAGAAAAGATGAGTAA 1509 0.4301 MTTSLHQASIAESNLQIMEARPSISIERSSAEELNVMGMSGVLSSSLAVLPTPLEETYNKLPDSPLAFVEEGLMSRPLTHSGHLNNNGAVGHIFSSSPGYSTALHHSSLSPHEKHSRNAHIISHSSTNMATLPPFSSNSGPLPSKPSSHFPNENSASWHTDSVPSFLDFPANTSIDSGRVESGACTIMTSEEYCKQNDWQEWADQLISDDDTLTSNLNDLLADNVPDPEPKEPFQVSKPSLQLPGHPSEGHQQLPASSEENCAGAAPSFSAKSAPSKPRMRWTPELHEAFVDAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPDSSEGVSEKKTSSIEEMSSLDLKTGIDITEALRLQMVVQKQLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKPETEMFKASLSTAENPSGSSLDAMQDVPAKSASMVDSYKPGPDQAIGSTTVVEGSVEIRGKHDSPKTQLSENPKQHANANDDAAQASKRQRKDE* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0989 502 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 277 331 IPR006447 GO:0003677
Ahy12g0989 502 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL4-RELATED 42 499 - -
Ahy12g0989 502 MobiDBLite consensus disorder prediction 128 156 - -
Ahy12g0989 502 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 274 334 IPR017930 -
Ahy12g0989 502 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 42 499 IPR044848 GO:0003700
Ahy12g0989 502 MobiDBLite consensus disorder prediction 218 280 - -
Ahy12g0989 502 Pfam MYB-CC type transfactor, LHEQLE motif 363 408 IPR025756 -
Ahy12g0989 502 Pfam Myb-like DNA-binding domain 279 330 IPR001005 -
Ahy12g0989 502 MobiDBLite consensus disorder prediction 478 492 - -
Ahy12g0989 502 MobiDBLite consensus disorder prediction 439 502 - -
Ahy12g0989 502 Gene3D - 276 335 - -
Ahy12g0989 502 SUPERFAMILY Homeodomain-like 275 331 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0989 Ahy-Chr12 21030820 21036357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0989 18 427 G2-like Transcription Factor Family AT4G28610 47.183 1.94e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy12g0989 Myb_DNA-binding 1.70E-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0989 - - aip:107624999 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0989 12 21030820 21036357 Ahy12g0989 12 21030820 21036357 ECH
Ahy12g0989 12 21030820 21036357 Ahy9g1320 9 45174350 45178775 hybridization
Ahy16g1400 16 28272168 28278009 Ahy12g0989 12 21030820 21036357 PCT
Ahy6g0066 6 958115 963952 Ahy12g0989 12 21030820 21036357 PCT
Ahy16g1107 16 20044243 20048012 Ahy12g0989 12 21030820 21036357 PCT
Ahy12g0989 12 21030820 21036357 Ahy16g1400 16 28272168 28278009 PCT
Ahy12g0989 12 21030820 21036357 Ahy6g0066 6 958115 963952 PCT