Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0984 ATGCGCCTCGTCGTGCTGGCATTCTTTTTTCGCTTCCGGATCCTAAATCCAGTCCATGATGCATTTCCACTCTGGTTGGTCTCAGTAATTTGTGAAATATGGCTAGCATTGTCCTGGCTAGTTGATCAGCTACCAAAATGGTTCCCCATCACACGCGAAACCAGCCTCGAGCGCTTGTCCTTGCGCTTCGAGCAAGAAGGCAGGCAAAACAAACTATCCCCTGTTGATGTTTTTGTGACAACTGCAGACCCTTTTAAAGAACCACCAATCATAACAGCAAACACTGTCTTATCAGTACTTTCTGTTGATTATCCAGTAGAAAAGGTTAACTGCTATGTCTCGGATGACAGTGCTTCAATGCTTCTCTATGATACTTTGTATGAAACTTCAGAGTTTGCAAGAATTTGGATCCCTTTTGTGAATAAGTACAGCATTGAGCCAAGAGCACCTGAATTCTATTTCTCTCAGAAGGTTGATTACTTGAAAGACAAGGTTCATCCTACATTTGTAAGGGACCGCAGGGCGATGAAGAGAGAGTATGAAGAGTTTAAGGTGAGAATCAATGTGTTGATTTCAAAGGCTCAGAAGAAACCAGAAGAGGGTTGGGTGATGAAAGATGGAACACCTTGGCCTGGGAACAACACTGAAGATCATCCAGGGATGATTCAGGTGTGTTTGGGAAGTGCTGGTACACTGGACATGGATGGCAAACAACTGCCACGGCTTGTGTATGTTTCGAGGGAGAAGCGCCCCGGCTATCGACACCACGAGAAAGCTGGTGCTATGAATGCTTTGGTTCGAGTTTCTGCTGTTCTTAGCAATGCTCCTTTTGTGTTGAACTTGGATTGTGACCAGTATATCAATAATAGCAAGACTATAAGGGAGGCTATGTGCTTCTTAATGGATCCTCAGCTTGGAAAGAGGATTTGTTTTGTCCAATTTCCAAGAAGGTTCGATGGCATCGATAACAATGATCGATATGCTAATCGCAATACCGTGTTCTATGATATCGTGATGAAAGGACTTGATGGGATTCAAGGCCCAGTGTATGTTGGCACTGGTTGTGTTTTCAATAGGCAGGCAATATATGGCAATAAACCGCCATCTGATAAAAAGCCGAAGACAAGCCAGTCTTCATGCTGCTGCTGCTGCTGTTCTGGTGATGATTCTGGGTCCACGTTTGATCTTGAAGAGATTGATGAAGGACTTGAAGGGTTTGAAGAGAAAGAGGAAACATCTTTCATTTCAATGAAAAACTTTGAGAAGCAATATGGAATGTCACCAGTTTTGATTGCTTCTGTTTTGATGGAAGATGGTGGACTTCCAAAAGTGACCAATACACAGTTGCTGATTAAGGAAGCAATTCATGTTATTAGCTGTGGTTATGAAGAGAAAACTGAATGGGGCAAAGAGATTGGGTGGCTTTATGGCTCAGTGACAGAAGATATCTTAACAGGATTTAACATGCATTGTAGAGGGTGGAAATCAGTGTACTGCATGCCAAAGAGAGATGCTTTTAAAGGATCTGCTCCTATAAATCTATCTGATAGATTACACCAAGTTCTGAAATGGGCTCTTGGTTCAACTGAGATTTTCTTTAGTGGCTATTGCCCATTGTGGTATGGTTATACTGGTAAACTAAAATTGCTACAGAGGTTGGCTTACACTAATACTATTGTTTATCCTTTCACTTCCATCCCTCTCTTGGTGTACTGCACGATTCCAGCCGTCTGTCTTCTGACTGGAAAATTCATTGTTCCAGCGTTAACAAATGTTGCTAGCATTTGGCTAATGGCTCTGTTCACCTCCATGATCTTAACGTGCGTGCTAGAGCTCCGGTGGAGTGGGGTAAACATTCAGGACTGGTGGCGCAACGAGCAATTCTGGGTGATCGGCAGCGTCTCCTCGCACCTCTTTGCCGTGTTCCAAGGTCTCCTCAAAGTTGGTGGAGTACACTCTAACTTCACAATCAGAGCAAAATCCACAGATAACAACAGTGTATCCAATCAACTCTATCTCTTCAAATGGACAACTCTTATGATACCACCAACAAGTCTTGTTATCTTGAACATGGTTGGGATTGTGGCCGGAATATCTGATGCCATTAACAATGGATATAACTCATGGGGACCTTTGTTTGGGAAGCTTTTCTTTTCTTTTTGGGTCATTATTCATCTATATCCTTTCCTTAAAGGTCTAATGGGAAGGCAGAACAGAACACCTACCATTGTTGTCCTCTGGTCAATACTTTTAGCATTGGTTTTCTCAATGATTTGGGTGAGAATTGATGTGTTCTTGCCCAAGAAAACAGGTCCAGTTCTAGTACAATGTGGGTTAGAATGCTAA 2346 0.4267 MRLVVLAFFFRFRILNPVHDAFPLWLVSVICEIWLALSWLVDQLPKWFPITRETSLERLSLRFEQEGRQNKLSPVDVFVTTADPFKEPPIITANTVLSVLSVDYPVEKVNCYVSDDSASMLLYDTLYETSEFARIWIPFVNKYSIEPRAPEFYFSQKVDYLKDKVHPTFVRDRRAMKREYEEFKVRINVLISKAQKKPEEGWVMKDGTPWPGNNTEDHPGMIQVCLGSAGTLDMDGKQLPRLVYVSREKRPGYRHHEKAGAMNALVRVSAVLSNAPFVLNLDCDQYINNSKTIREAMCFLMDPQLGKRICFVQFPRRFDGIDNNDRYANRNTVFYDIVMKGLDGIQGPVYVGTGCVFNRQAIYGNKPPSDKKPKTSQSSCCCCCCSGDDSGSTFDLEEIDEGLEGFEEKEETSFISMKNFEKQYGMSPVLIASVLMEDGGLPKVTNTQLLIKEAIHVISCGYEEKTEWGKEIGWLYGSVTEDILTGFNMHCRGWKSVYCMPKRDAFKGSAPINLSDRLHQVLKWALGSTEIFFSGYCPLWYGYTGKLKLLQRLAYTNTIVYPFTSIPLLVYCTIPAVCLLTGKFIVPALTNVASIWLMALFTSMILTCVLELRWSGVNIQDWWRNEQFWVIGSVSSHLFAVFQGLLKVGGVHSNFTIRAKSTDNNSVSNQLYLFKWTTLMIPPTSLVILNMVGIVAGISDAINNGYNSWGPLFGKLFFSFWVIIHLYPFLKGLMGRQNRTPTIVVLWSILLALVFSMIWVRIDVFLPKKTGPVLVQCGLEC* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0984 781 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 214 365 IPR029044 -
Ahy12g0984 781 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 1 781 - -
Ahy12g0984 781 SUPERFAMILY Nucleotide-diphospho-sugar transferases 86 586 IPR029044 -
Ahy12g0984 781 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 781 - -
Ahy12g0984 781 Pfam Cellulose synthase 75 773 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0984 Ahy-Chr12 20877099 20881749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0984 61 781 Glycosyltransferase AT5G44030 72.597 0.0 1178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0984 K10999 - gmx:100777278 1327.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0984 12 20877099 20881749 Ahy2g0905 2 18096451 18101757 hybridization