Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0962 ATGGATCATATTATTGGTGGGAAGTTTAAACTTGGAAGGAAAATTGGGAGTGGGTCTTTTGGGGAGCTCTTTATATGTGTTAATATACAAACTGGAGAGGAGGTTGCTTGTAAGCTGGAGCCTGTGAAGACCAGGCATCCACAGCTTCACTATGAGTCGAAATTGTATATGCTTCTCCAAGGAGGAACGGGGATTCCCCATCTCAAGTGGTTTGGTGTTGAGGGAGACTACAATGTCATGGTTATTGACCTCCTCGGTCCAAGTCTAGAAGATTTGTTTAATTATTGCAACCGTAAGTTCTCATTGAAGACAGTGTTAATGCTTGCTGATCAATTGATTAACAGAGTCGAATATATGCATTCAAGAGGTTTTCTTCACCGGGACATAAAGCCAGACAATTTTTTAATGGGCTTAGGCCGCAAAGCAAATCAGGTATACATTATTGACTATGGCCTTGCGAAAAAGTATAGGGATCTTCAAACTCATAGACACATACCATACAGGGAAAACAAGAATCTTACTGGTACAGCACGCTATGCAAGTGTCAACACACATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGCTATGTGCTCATGTACTTCTTAAGGGGAAGTCTTCCCTGGCAGGGACTTAAGGCTGGCAACAAAAAACAAAAATATGATAGAATCAGTGAGAAGAAAGTATCAACTCCCATAGAGGTTCTCTGCAAATCATATCCTGCTGAGTTTGTATCATACTTCCATTACTGCCGTTCTTTGCGGTTTGAAGACAAGCCAGATTATTCATATCTAAAGAGACTTTTCCGTGACCTGTTTATTCGAGAAGGCCATCAATTCGACTATGTTTTTGACTGGACTGTACTGAAGTATCCACATGTTGGCGACAGCAGCTCTAGAGGGCGGAATGGTGCCGGCAAGGCAGCTATGAATGCTGGGCCAACTGCATACAAACCTGAAAAGATCTCAGTTGGAAGAGATAGCCGAGAGCAATACGATGTATACGACCGGAGGAACCAAATGACTAGCCCTCCTGTTGATCACATGAGATACAGAAGTTCTGACGATGTAGCAATACACAGGGATATGCACCATGATGAATATGACGAATACAATACAACTCGTTATGCGAGCACTTCAAGAAGGGCTATAGTCACATCAAATAAGCATGTTTCCTCAGGCGACTATGGTTATGCTGGGATGACACCGAGTAGGGGCTACGGTGGGATGACCCCAAGTAGAGGCTACGGTAACCCTGGCATGACCCCAAGTAGGGGTCATCCCACCGGTCATGCCGGTAACCCTGGCATGACCCCGAGCAGGGGCCATCCAACCACCACACATCGGATTCAACCTATTTATGAGACCAAACCAGCAACTTTTACTCGCAATGGATCTACAAGACGCCAGCGTGATGAAACTCTAAGGAACTTCGAGCACCTTAATATCAGGAAGTAA 1470 0.4429 MDHIIGGKFKLGRKIGSGSFGELFICVNIQTGEEVACKLEPVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYDRISEKKVSTPIEVLCKSYPAEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGHQFDYVFDWTVLKYPHVGDSSSRGRNGAGKAAMNAGPTAYKPEKISVGRDSREQYDVYDRRNQMTSPPVDHMRYRSSDDVAIHRDMHHDEYDEYNTTRYASTSRRAIVTSNKHVSSGDYGYAGMTPSRGYGGMTPSRGYGNPGMTPSRGHPTGHAGNPGMTPSRGHPTTTHRIQPIYETKPATFTRNGSTRRQRDETLRNFEHLNIRK* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0962 489 CDD STKc_CK1_delta_epsilon 8 281 - -
Ahy12g0962 489 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0962 489 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 399 - -
Ahy12g0962 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Ahy12g0962 489 MobiDBLite consensus disorder prediction 302 323 - -
Ahy12g0962 489 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Ahy12g0962 489 PANTHER CASEIN KINASE-RELATED 1 399 - -
Ahy12g0962 489 Gene3D Transferase(Phosphotransferase) domain 1 1 335 - -
Ahy12g0962 489 MobiDBLite consensus disorder prediction 415 451 - -
Ahy12g0962 489 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0962 489 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Ahy12g0962 489 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0962 Ahy-Chr12 20378212 20384974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0962 1 230 EF-hand Containing Proteins AT2G38910 26.506 9.24e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Ahy12g0962 Pkinase 9.00E-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0962 K08960 K08959 gmx:100789031 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0962 12 20378212 20384974 Ahy12g0962 12 20378212 20384974 ECH
Ahy12g0962 12 20378212 20384974 Ahy2g0880 2 17590481 17596441 hybridization
Ahy16g1379 16 27616975 27622297 Ahy12g0962 12 20378212 20384974 PCT
Ahy6g0082 6 1132209 1137329 Ahy12g0962 12 20378212 20384974 PCT
Ahy12g0962 12 20378212 20384974 Ahy16g1379 16 27616975 27622297 PCT
Ahy12g0962 12 20378212 20384974 Ahy6g0082 6 1132209 1137329 PCT