Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0960 ATGCCTTCTTCAGTTCTATCCAGTGATAGTATGCATATTGGGCTTCTTGCAGCAGCTGCCCATGCTGCAGCAACTAATAGCTGTTTCACGGTGTTCTATAATCCAAGGGCTAGTCCATCCGAGTTCGTCATACCACTTTCAAAATATATCAAAGCTGTATACCATACACGTGTTTCTGTTGGTATGCGTTTCAGGATGCTTTTCGAGACCGAAGAATCAAGTGTCCGGAGGTACATGGGTACAATAACTGGAATAAGTGACTTGGATCCAGTTCGTTGGCCAAATTCTCATTGGCGATCTGTAAAGGTTGGTTGGGATGAATCCACAGCAGGAGATAGGCAGCCAAGAGTATCACTATGGGAAATTGAGCCTTTAACAACATTCCCAATGTATCCGTCACTATTTCCGCTCAGATTGAAACGTCCATGGCATCCTGGCACCTCATCTTTTCTTGATGGCAGAGATGACCCAACTAATGGGCTAATGTGGCTTAGAGGTGGACCTGGCGACCAAGGTCTGAATTCAATCAATTTTCAAAGTGTTGGAATGCTGCCATGGATGCAGCAGAGGCTTGATCCGGCTTTGCTTGGAAATGATCATAATCAGCAGTACCAAGCCATGTTGGCAGCTGGTTTGCAGAACATAGGGAGTGGAGAACTCTTGAGGCAACAAATGTTGAATTTCCAACAGCCTTTCAATTATCTTCATCAATCAGGAAATGTCAACACTTCTATCCAGCTTCAGCAGCAGCAGCAAACGATTCAGCAATCAGTGCCTTCTAATATCTTGCAGCCACAAGCACCAGTATTGGGAGAGAACATGACTCAGCAGCAGCTCTTTCAGAAATCGCACAACAACCGAGAAGACCATGCGGAGCAGCACACTTATCAAGATGCACTTCTAGTTCAGGGTGACCAGCTCCACCAAAGGCAACACTCTAGTTTGCCTTCGCCATCGTATTCAAAATCAGAGTTTGTAGATTCAAGCATGAAGTTTGAAGCATCAGGTTCACCAGGACAGAACATGCTTGGTTCACTTTGTCCTGAAGGGAGCAGCAATCTCTTGAATTTATCCAGAGGTGGTCATTCGATACCGACAGAACAGTCACCCCAACAATCATGGCCTGCAAAGTATACACCTATGCAGGTTAATGCTTTTGGCAACTCAATGTCACATGTGCAATATTCTGGAAAAGATATTGCAGTGGCATCACCACATCGTAATTCAGACACTCAGAATCCAACCCTCTTTGGAGTCAATATTGATTCATCCGGTCTTCTACTCCCTGCCACTGTCCCACATTATACGACTTCATCCGCTGATACCGATGCTTCAACAATGCCATTAGGGAATTCTGGATACCAGGGTCCTCTATATGCTTGTATGCAAGATTCATCTGAGTTAATGCAAAGTGCGGGACAAGTTGACCCCCAAAACCAGACACCAACCTTTGTCAAGGTTTACAAATCAGGGTCAGTTGGGCGCTCGCTTGACATCTCCCGGTTCAGCAGCTATCATGAACTGCGAGAAGAGTTGGCTCAGATGTTTGGAATTGAGGGGAAGTTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTCGTCGACAGGGAGAATGATATTCTTCTCCTTGGGGACGATCCGTGGGAATCATTTGTCAACAATGTTTGGTATATCAAAATACTTTCACCTGAAGATATTCAAAAGATGGGAGATCAAGGCGTAGAATCTCGCGACAGTGCTCCCGGCCTACCATCAATAGGCGATTACTGA 1773 0.4535 MPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSFLDGRDDPTNGLMWLRGGPGDQGLNSINFQSVGMLPWMQQRLDPALLGNDHNQQYQAMLAAGLQNIGSGELLRQQMLNFQQPFNYLHQSGNVNTSIQLQQQQQTIQQSVPSNILQPQAPVLGENMTQQQLFQKSHNNREDHAEQHTYQDALLVQGDQLHQRQHSSLPSPSYSKSEFVDSSMKFEASGSPGQNMLGSLCPEGSSNLLNLSRGGHSIPTEQSPQQSWPAKYTPMQVNAFGNSMSHVQYSGKDIAVASPHRNSDTQNPTLFGVNIDSSGLLLPATVPHYTTSSADTDASTMPLGNSGYQGPLYACMQDSSELMQSAGQVDPQNQTPTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDILLLGDDPWESFVNNVWYIKILSPEDIQKMGDQGVESRDSAPGLPSIGDY* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0960 590 MobiDBLite consensus disorder prediction 331 374 - -
Ahy12g0960 590 PANTHER AUXIN RESPONSE FACTOR 1 578 - -
Ahy12g0960 590 ProSiteProfiles PB1 domain profile. 482 566 IPR000270 GO:0005515
Ahy12g0960 590 SUPERFAMILY CAD & PB1 domains 480 556 - -
Ahy12g0960 590 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 578 IPR044835 GO:0003677|GO:0006355|GO:0009725
Ahy12g0960 590 MobiDBLite consensus disorder prediction 570 590 - -
Ahy12g0960 590 Gene3D - 478 571 - -
Ahy12g0960 590 MobiDBLite consensus disorder prediction 307 326 - -
Ahy12g0960 590 Pfam Auxin response factor 19 102 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Ahy12g0960 590 Pfam AUX/IAA family 476 566 IPR033389 -
Ahy12g0960 590 Gene3D - 57 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0960 Ahy-Chr12 20341357 20345732 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0960 1 574 B3 DNA Binding Superfamily AT5G37020 63.248 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0960 - - adu:107458034 1093.18