Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0958 ATGAAGCTTTCAACATCAGGGTTGCCTCAGCAGGGACAACATGAAGGAGGGGAGAAGAAGTGCTTGAATTCTGAGCTATGGCATGCATGTGCGGGTCCATTGGTGTCCCTACCAACTGCAGGGACTCGTGTGGTTTACTTCCCTCAGGGTCATAGTGAGCAGGTTGCTGCCACAACTAACAGAGAAGTTGATGGCCACATACCGAATTACCCGAGCTTGCCTCCCCAGTTGATTTGCCAACTTCACAATGTCACGATGCATGCAGATGTTGAAACAGATGAAGTTTATGCCCAAATGACACTGCAGCCGTTGACTCCGCAAGAGCAGAAGGATACATTTCTTCCCATGGAATTGGGAGTTCCAAGTAAGCAGCCCTCAAATTATTTTTGCAAGACCTTAACTGCTAGTGACACCAGCACACATGGAGGGTTTTCTGTTCCGCGTCGTGCAGCTGAGAAAGTTTTCCCTCCGCTGGATTTCTCATTGCAACCGCCTGCACAAGAACTAATTGCTAGAGATCTCCATGATGTTGAGTGGAAATTTCGTCATATTTTTAGGGGACAGCCAAAGAGGCACCTTCTTACTACCGGCTGGAGTGTATTTGTTAGTGCCAAAAGACTTGTGGCAGGAGATTCTGTGCTTTTCATATGGAATGAAAAGAATCAGCTTCTTTTGGGGATACGTCGTGCCAATCGACCACAAACTGTAATGCCTTCTTCAGTTCTATCCAGTGATAGTATGCATATTGGGCTTCTTGCAGCAGCTGCCCATGCTGCAGCAACTAATAGCTGTTTCACGGTGTTCTATAATCCAAGGGCTAGTCCATCCGAGTTCGTCATACCACTTTCAAAATATATCAAAGCTGTATACCATACACGTGTTTCTGTTGGTATGCGTTTCAGGATGCTTTTCGAGACCGAAGAATCAAGTGTCCGGAGGTACATGGGTACAATAACTGGAATAAGTGACTTGGATCCAGTTCGTTGGCCAAATTCTCATTGGCGATCTGTAAAGGTTGGTTGGGATGAATCCACAGCAGGAGATAGGCAGCCAAGAGTATCACTATGGGAAATTGAGCCTTTAACAACATTCCCAATGTATCCGTCACTATTTCCGCTCAGATTGAAACGTCCATGGCATCCTGGCACCTCATCTTTTCTTGATGGCAGAGATGACCCAACTAATGGGCTAATGTGGCTTAGAGGTGGACCTGGCGACCAAGGTCTGAATTCAATCAATTTTCAAAGTGTTGGAATGCTGCCATGGATGCAGCAGAGGCTTGATCCGGCTTTGCTTGGAAATGATCATAATCAGCAGTACCAAGCCATGTTGGCAGCTGGTTTGCAGAACATAGGGAGTGGAGAACTCTTGAGGCAACAAATGTTGAATTTCCAACAGCCTTTCAATTATCTTCATCAATCAGGAAATGTCAACACTTCTATCCAGCTTCAGCAGCAGCAGCAAACGATTCAGCAATCAGTGCCTTCTAATATCTTGCAGCCACAAGCACCAGTATTGGGAGAGAACATGACTCAGCAGCAGCTCTTTCAGAAATCGCACAACAACCGAGAAGACCATGCGGAGCAGCACACTTATCAAGATGCACTTCTAGTTCAGGGTGACCAGCTCCACCAAAGGCAACACTCTAGTTTGCCTTCGCCATCGTATTCAAAATCAGAGTTTGTAGATTCAAGCATGAAGTTTGAAGCATCAGGTTCACCAGGACAGAACATGCTTGGTTCACTTTGTCCTGAAGGGAGCAGCAATCTCTTGAATTTATCCAGAGGTGGTCATTCGATACCGACAGAACAGTCACCCCAACAATCATGGCCTGCAAAGTATACACCTATGCAGGTTAATGCTTTTGGCAACTCAATGTCACATGTGCAATATTCTGGAAAAGATATTGCAGTGGCATCACCACATCGTAATTCAGACACTCAGAATCCAACCCTCTTTGGAGTCAATATTGATTCATCCGGTCTTCTACTCCCTGCCACTGTCCCACATTATACGACTTCATCCGCTGATACCGATGCTTCAACAATGCCATTAGGGAATTCTGGATACCAGGGTCCTCTATATGCTTGTATGCAAGATTCATCTGAGTTAATGCAAAGTGCGGGACAAGTTGACCCCCAAAACCAGACACCAACCTTTGTCAAGGTTTACAAATCAGGGTCAGTTGGGCGCTCGCTTGACATCTCCCGGTTCAGCAGCTATCATGAACTGCGGGAAGAGTTGGCTCAGATGTTTGGAATTGAGGGGAAGTTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTCGTCGACAGGGAGAATGATATTCTTCTCCTTGGGGACGATCCGTGGGAATCATTTGTCAACAATGTTTGGTATATCAAAATACTTTCACCTGAAGATATTCAAAAGATGGGAGATCAAGGCGTAGAATCTCGCGACAGTGCTCCCGGCCTACCATCAATAGGGGATTACTGA 2481 0.4591 MKLSTSGLPQQGQHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSFLDGRDDPTNGLMWLRGGPGDQGLNSINFQSVGMLPWMQQRLDPALLGNDHNQQYQAMLAAGLQNIGSGELLRQQMLNFQQPFNYLHQSGNVNTSIQLQQQQQTIQQSVPSNILQPQAPVLGENMTQQQLFQKSHNNREDHAEQHTYQDALLVQGDQLHQRQHSSLPSPSYSKSEFVDSSMKFEASGSPGQNMLGSLCPEGSSNLLNLSRGGHSIPTEQSPQQSWPAKYTPMQVNAFGNSMSHVQYSGKDIAVASPHRNSDTQNPTLFGVNIDSSGLLLPATVPHYTTSSADTDASTMPLGNSGYQGPLYACMQDSSELMQSAGQVDPQNQTPTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDILLLGDDPWESFVNNVWYIKILSPEDIQKMGDQGVESRDSAPGLPSIGDY* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0958 826 MobiDBLite consensus disorder prediction 543 562 - -
Ahy12g0958 826 MobiDBLite consensus disorder prediction 567 610 - -
Ahy12g0958 826 SUPERFAMILY DNA-binding pseudobarrel domain 113 258 IPR015300 -
Ahy12g0958 826 CDD B3_DNA 128 229 IPR003340 GO:0003677
Ahy12g0958 826 Pfam AUX/IAA family 712 802 IPR033389 -
Ahy12g0958 826 MobiDBLite consensus disorder prediction 806 826 - -
Ahy12g0958 826 Pfam Auxin response factor 255 338 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Ahy12g0958 826 Pfam B3 DNA binding domain 129 230 IPR003340 GO:0003677
Ahy12g0958 826 ProSiteProfiles B3 DNA-binding domain profile. 129 231 IPR003340 GO:0003677
Ahy12g0958 826 SMART B3_2 129 231 IPR003340 GO:0003677
Ahy12g0958 826 PANTHER AUXIN RESPONSE FACTOR 1 814 - -
Ahy12g0958 826 Gene3D - 714 807 - -
Ahy12g0958 826 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 814 IPR044835 GO:0003677|GO:0006355|GO:0009725
Ahy12g0958 826 Gene3D - 127 230 IPR015300 -
Ahy12g0958 826 SUPERFAMILY CAD & PB1 domains 716 792 - -
Ahy12g0958 826 Gene3D - 293 365 - -
Ahy12g0958 826 ProSiteProfiles PB1 domain profile. 718 802 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0958 Ahy-Chr12 20284362 20291861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0958 99 810 B3 DNA Binding Superfamily AT5G37020 68.465 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Ahy12g0958 AUX_IAA 3.70E-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0958 - - adu:107458034 1576.99