Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0956 ATGATGAAAGTTGGGTTTGAGGTTGTTCATGGAAATTCAAACATGATCATCAACCGTTCCTCTATGCATGAAACTTGGGACTATTCAAATCTTGTTTCTTTGCCACCTCCAATCCCATCAATCCAATTTCCAATAAAGCCCTCACCAAATGAAAACCAACAAAATGAAACATGTGATTGGGTTGACAACATTGCCAAGCACCTTAATGTCAATGTTGATGAAGACTTACCACAACAAACAGCTAATGATGATGATAATAGCTTGTTATTATTGTCCAATAATAATCCTTCATCAATTCACCATCCCAACTTCAATCCAATAAGAAAAAACACTTTTTGGAAAACCCCATTTGATCCTTGCACCAATATTGACCCTCCTAGCACCAATAACTTTGGTCTTCATCATCAAGTTCAATCAAACACCTCAAATTTAGACCACAATATTATTATTAACGACAATAGTAGTAGTAGTAATAATAATAACAATAATATCCATGATCAAGGTTTGAATTTGATTACCCTTCTAATGGAATGTGCTGTGGCAATCTCTGTGGACAACCTTGTTGATGCTCAAAGGATGTTGTTGGAGCTAACACAATTGGCCTCACCTTACAAGGCATCATGTGCTGAAAGAGTTGTTGCATATTTTGCCAAAGCCATGAATAGTAGGGTCATGAATTCTTTTCTTGGTGTGTGTTCACCTTTGATTATTGATCACAAGAGCATTCATTCATCATTCCATGTTTTCAACAATGTTTCCCCTTTCATCAAATTTGCACATTTCACTTCCAACCAAGCAATTCTTGAGGCAGTGAATAGGTGCCAATGCATACACATCATTGATTTGGACATCATGCAAGGCCTTCAATGGCCAGCATTCTTCCACATTCTTGCCACAAGGTATGAGGGTCCACCCGAGGTCACAATGACCGGTATCGGCGCATCCATGGACCTCCTCGTCGAGACGGGGAAACAGCTCTCGAATTTCGCCAGACGGCTTGGAATGCCATTGAAATTCCACCCTGTCGTCGCGAAATTCGGGGAAATTGACGCATCTATGGTGCAAATTAGGTCTTGTGAGACGGTGGCGGTTCATTGGTTGCAACATTCAATGTACGATTCAACCGGGCCGGACTGGATGACCTTGAGACTAATCAAGGAATTGGAGCCAAGAATCATAACATTAGTGGAACAAGATGTAAACAATGGAGGATCATTCTTGGATAGGTTTGTTGGATCATTGCACTACTACTCAACACTATTTGATTCCCTTGGTGCATACTTGGAAATTGATGATCCTAATAGGCACAATGTTGAGCATGGAGTGCTGTCTAGGGAGATCAACAACATATTGGGCATAGGTGGACCATCAAGGAGTGGTGAGGAAAAGTTTATTAGGCAATGGAGGAATGAACTCATTTCAAGGAGCAATTGGTTTGTGCAAGTTCCAATGAGTGCTAATTCAATGGCTCAAGCACAATTGATACTTAATATGTTCTCACCACCACATGGTTATAGCCTTGCTCATGTTGATGGCACATTGAGGCTTGGTTGGAAGGATACTAGCTTGTACACTGCTTCTGCATGGACTTGTAATGCTTTTAATTAG 1608 0.4055 MMKVGFEVVHGNSNMIINRSSMHETWDYSNLVSLPPPIPSIQFPIKPSPNENQQNETCDWVDNIAKHLNVNVDEDLPQQTANDDDNSLLLLSNNNPSSIHHPNFNPIRKNTFWKTPFDPCTNIDPPSTNNFGLHHQVQSNTSNLDHNIIINDNSSSSNNNNNNIHDQGLNLITLLMECAVAISVDNLVDAQRMLLELTQLASPYKASCAERVVAYFAKAMNSRVMNSFLGVCSPLIIDHKSIHSSFHVFNNVSPFIKFAHFTSNQAILEAVNRCQCIHIIDLDIMQGLQWPAFFHILATRYEGPPEVTMTGIGASMDLLVETGKQLSNFARRLGMPLKFHPVVAKFGEIDASMVQIRSCETVAVHWLQHSMYDSTGPDWMTLRLIKELEPRIITLVEQDVNNGGSFLDRFVGSLHYYSTLFDSLGAYLEIDDPNRHNVEHGVLSREINNILGIGGPSRSGEEKFIRQWRNELISRSNWFVQVPMSANSMAQAQLILNMFSPPHGYSLAHVDGTLRLGWKDTSLYTASAWTCNAFN* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0956 535 Pfam GRAS domain family 171 530 IPR005202 -
Ahy12g0956 535 ProSiteProfiles GRAS family profile. 162 530 IPR005202 -
Ahy12g0956 535 PANTHER OS05G0485400 PROTEIN 58 531 - -
Ahy12g0956 535 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 58 531 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0956 Ahy-Chr12 20129917 20131891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0956 166 530 GRAS Transcription Factor Family AT3G54220 52.291 2.99e-127 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy12g0956 GRAS 3.70E-99 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0956 - - gmx:100775656 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0956 12 20129917 20131891 Ahy12g0956 12 20129917 20131891 ECH
Ahy12g0956 12 20129917 20131891 Ahy2g0831 2 16017952 16019577 hybridization