Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0954 ATGGATTCGGCGAGGAGTTGGTTTCAGAAGTTTCAGCCTCGTGATAAAACAAAAGGGTTTGGAAAGAAGAAGGAGGATGATAACAACGGAGGAGGAGCAGACGATTCGAGTGTAGTGGTTGATGAAGCTTCTCTTTCCAATGACACAAAGCAGAAGGTTGCAGCAGCAAAGCAGTATATTGAAAACCATTACAAGGAGCAAATGAAGAATCTTCAGGAGAGGAAGGAGCGTCGTACCTTTTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAAGATCAAAACAACCTACTTAAATTTTTGGAAAAAAAGGAAACTGAATATATGCGCCTTCAAAGGCATAAGATGGGAGTTGATGATTTTGAATTGCTGACTATGATTGGCAAAGGTGCATTTGGTGAGGTCAGAGTCTGTAGGGAAAAGACTACGGGTCAGGTTTATGCAATGAAAAAGCTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTTGAACATGTCAGAGCTGAAAGGAATCTACTTGCTGAGGTTGACAGCAATTGCATAGTCAAACTGTATTGTTCTTTTCAGGATGATGAGCATCTATATCTTATTATGGAGTACCTTCCAGGTGGGGATATGATGACACTGCTTATGAGAAAGGATACCTTGACAGAAGATGAAGCCAGATTTTATGTAGCAGAAACAATTCTGGCTATTGAATCTATACATAAACACAATTATATACATAGGGATATCAAGCCTGACAACTTAATACTGGATAGATATGGACACTTGAGACTGTCTGATTTTGGACTTTGTAAACCATTAGATTGTAGTACAATTGCAGAAGGGGATTTTTCTGTGGTTCCGAATGTGAATGGATCTAATGAACGTGTTATTTCAAAACGCACACAGCGAGAACAATTACAACACTGGCAACAGAACAGGAGGACACTTGCTTATTCCACTGTTGGTACACCAGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGTTATGGAATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTATGAGATGCTGGTAGGATATCCACCATTTTATTCTGATGATCCGATGACAACATGTAGGAAGATAGTAAACTGGAGATCTCACTTGAAATTTCCCGAAGAAGCAAGGCTGTCCCGAGAGGCTAAAGATCTAATTTGTAAACTTCTGTGCAATGTAAACCACAGGTTGGGGTCCAAAGGTGCAGATGAAATAAAGGCTCACCCATTCTTCAATGGTGTTGAATGGGATAAGCTGTATCAAATAGAAGCTGCATTTATTCCAGAAGTAAATAATGAGCTAGATACTCAGAACTTTGAGAAGTTTGAAGAGTCAGACATCCAAACTCAATCATCATCAAGACATGGTCCGTGGAGGAAGATGCTTTCATCTAAGGACTTGAATTTTGTTGGATACACATACAAGAACTTTGAAATTGTCAACGACTATCAAGTTCCTGGGATGGCTGAACTAAAGAGGAAACAGAACAAAACAAATAGGCCATCCATTAAGTCACTCTTTGAGTCTGATTCAGAGATATCAGAATTATCTGAAGTTCCTGAAACATCTTCAACCAGACAATCTTCTCAAGGAAGCTTTATGAAGCTCTTGCCACCCCAATTAGAGGTATCTAACAGTGAGAAGAGGATTTCTCCTAAGTCATAA 1683 0.3969 MDSARSWFQKFQPRDKTKGFGKKKEDDNNGGGADDSSVVVDEASLSNDTKQKVAAAKQYIENHYKEQMKNLQERKERRTFLEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTGQVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEHLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETILAIESIHKHNYIHRDIKPDNLILDRYGHLRLSDFGLCKPLDCSTIAEGDFSVVPNVNGSNERVISKRTQREQLQHWQQNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMTTCRKIVNWRSHLKFPEEARLSREAKDLICKLLCNVNHRLGSKGADEIKAHPFFNGVEWDKLYQIEAAFIPEVNNELDTQNFEKFEESDIQTQSSSRHGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKRKQNKTNRPSIKSLFESDSEISELSEVPETSSTRQSSQGSFMKLLPPQLEVSNSEKRISPKS* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0954 560 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 527 - -
Ahy12g0954 560 MobiDBLite consensus disorder prediction 9 31 - -
Ahy12g0954 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Ahy12g0954 560 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 527 - -
Ahy12g0954 560 SMART serkin_6 122 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0954 560 Gene3D Phosphorylase Kinase; domain 1 93 446 - -
Ahy12g0954 560 ProSiteProfiles AGC-kinase C-terminal domain profile. 418 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Ahy12g0954 560 CDD STKc_NDR_like 120 481 - -
Ahy12g0954 560 SMART pkinase_C_6 418 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
Ahy12g0954 560 ProSiteProfiles Protein kinase domain profile. 122 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0954 560 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Ahy12g0954 560 Coils Coil 64 84 - -
Ahy12g0954 560 Pfam Protein kinase domain 123 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0954 560 Pfam Protein kinase C terminal domain 436 480 IPR017892 GO:0004674|GO:0005524|GO:0006468
Ahy12g0954 560 MobiDBLite consensus disorder prediction 1 51 - -
Ahy12g0954 560 MobiDBLite consensus disorder prediction 500 560 - -
Ahy12g0954 560 Gene3D Transferase(Phosphotransferase) domain 1 206 437 - -
Ahy12g0954 560 MobiDBLite consensus disorder prediction 506 541 - -
Ahy12g0954 560 SUPERFAMILY Protein kinase-like (PK-like) 95 471 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0954 Ahy-Chr12 19983761 19991818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0954 1 513 AGC Kinase Gene Family AT2G20470 80.154 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Ahy12g0954 Pkinase 2.50E-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0954 K08790 - gmx:100779528 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0954 12 19983761 19991818 Ahy12g0954 12 19983761 19991818 ECH
Ahy12g0954 12 19983761 19991818 Ahy9g1212 9 33418911 33426409 hybridization
Ahy12g0954 12 19983761 19991818 Ahy16g1376 16 27385166 27390055 PCT
Ahy12g0954 12 19983761 19991818 Ahy6g0083 6 1144336 1149123 PCT