Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0933 ATGGGGAGCGTTCACAAAAATTCAACAAAGAGTTCTGTTGAATTTGATGATTTGAGTTTTGAGTATAGTGGTTCTAGTGAAGAAAATGATATAAATATATCTCAAAAGAAGGGTACAATTGATGAAGCTATGAAAATGGTCGATCGTGGAGATGGATTTGGTGAAGTTGAGAAGAAGTTAACTGAGTTGACCAGGGATGACATTTGGGGTATTGAGCATGATAGTGTAGAGCAGTGTGTTCAATTCTACAGAAATTATGCCAAAGTACATGGTTTTGTTGCAAGGTGTGATGAAAAGGGTTATGATTTCAACGGCAACCTTAACATGAGACAAATGGTTTGTAATAGAGAGGGTACACGGAGAAAGAAGTATCTGGAGATGGAGAATAGGAAAAGAGACCACAGGCCGATAACACGTGTAATGTGTCAAGCGAGAATTAGATTTCACTATGATATGAAATTGAGGAAGTGGAAAGTTACTGCATTTGAAGAGACTCACAATCATGACCTTATCCCACCTAAATATATACAATTTGTCCCCGCATATCGCGTAATGACCGAGGCCGACAAAGCGCAAGCCAACAGTCTACATGATTATGGTGTGAGAACTTGCCATATAATGGGGTTCATGTTAAAGCAAAAGGGAGGACCTGGAAAAATTGGTTTTACAAAGAAGGATTTGTATAATCATTTCGACAAATCAAAGCGTGCTAAAGTGAAAGATGGTGATGCATATGCAGCATTGAGTTACTTGATTTCTAAGGCCGATGAGGATCCATTGTTGCAAGGGAAATTTACTCTAAAAGATAATAAACTTGAAAATTTAGTATGGGCTGACGGAGCTAGCATAATCGATTATCAATGTTTTAGTGATGTACTAGCATTTGACACAACATACCAGAAGAATAAATATAACAAGCCATTGGTTGTCTTCTCAGGAACTAACCATCACGGGCAGACATGCATATTTGGTTGTGGCTTGCTAGCAGATGAGAAGCATGAGACATATGTATTAGTTTTGAAGATGTTTCTTGAAATAATGGGTAATAAATATCCAACAGCAGTGGTGACAGATGGTGATCTTGCAATGAGAGGAGCAATTAGAGAGGTGATGCCAAATGCAACGCGTGTGAAGCTATCAAAAATTCTGAGTTTCTTCATGGATTGA 1167 0.3822 MGSVHKNSTKSSVEFDDLSFEYSGSSEENDINISQKKGTIDEAMKMVDRGDGFGEVEKKLTELTRDDIWGIEHDSVEQCVQFYRNYAKVHGFVARCDEKGYDFNGNLNMRQMVCNREGTRRKKYLEMENRKRDHRPITRVMCQARIRFHYDMKLRKWKVTAFEETHNHDLIPPKYIQFVPAYRVMTEADKAQANSLHDYGVRTCHIMGFMLKQKGGPGKIGFTKKDLYNHFDKSKRAKVKDGDAYAALSYLISKADEDPLLQGKFTLKDNKLENLVWADGASIIDYQCFSDVLAFDTTYQKNKYNKPLVVFSGTNHHGQTCIFGCGLLADEKHETYVLVLKMFLEIMGNKYPTAVVTDGDLAMRGAIREVMPNATRVKLSKILSFFMD* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0933 388 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 73 374 IPR031052 GO:0006355
Ahy12g0933 388 Pfam MULE transposase domain 292 375 IPR018289 -
Ahy12g0933 388 Pfam FAR1 DNA-binding domain 81 171 IPR004330 -
Ahy12g0933 388 PANTHER OS02G0262500 PROTEIN 73 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0933 Ahy-Chr12 19007443 19008609 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g0933 FAR1 9.40E-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0933 - - adu:107487303 771.155