Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0912 ATGGGAGAGACTATTATTCATCAATTCTGCCATCTTGGCTCTTTCTCTTTTCTTGGTGGTGGTTCTGTGGTTTCACAAAATGTTCGAAAGTACACAATGGTAGCCAGAGAAAGAGCGGAGCTTCGGGGTCTAAATTTAGTGGGCCTGACTCGACGTGGATTCAGCATTGCAGAGATCAAGAACCTTAAAGCAGTCTATCGGAAGATATTCATGCGTGCTGATGCAAATGCCGGGTCATTCGAGGATAGGCTTACCGAAGTGCACTTAGATTTGTTTTTCAAACCAACTGCTGCTTTCATCTGCAATGTCAACTGCAATGTCAAATTCCCTTTTCAGGTGGCTAGCTTTCCATTTGATGACCATAATTGCCCCCCACTTCAACTGATTATCTCATTCTGTCATAGTGCATACTCGTGGTTGAAGTTAGATATTGAGAATGTTGTGGTTGTCCATTGTAAGGCTAGAATGGCAAGAACATGA 480 0.4292 MGETIIHQFCHLGSFSFLGGGSVVSQNVRKYTMVARERAELRGLNLVGLTRRGFSIAEIKNLKAVYRKIFMRADANAGSFEDRLTEVHLDLFFKPTAAFICNVNCNVKFPFQVASFPFDDHNCPPLQLIISFCHSAYSWLKLDIENVVVVHCKARMART* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0912 159 PANTHER ACYL-[ACYL-CARRIER-PROTEIN]--UDP-N-ACETYLGLUCOSAMINE O-ACYLTRANSFERASE 2 92 IPR010137 GO:0008610|GO:0008780
Ahy12g0912 159 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 107 159 IPR029021 -
Ahy12g0912 159 Gene3D Protein tyrosine phosphatase superfamily 108 159 IPR029021 -
Ahy12g0912 159 SUPERFAMILY Trimeric LpxA-like enzymes 3 77 IPR011004 -
Ahy12g0912 159 Gene3D - 47 103 IPR037157 -
Ahy12g0912 159 Gene3D Hexapeptide repeat proteins 1 46 - -
Ahy12g0912 159 Pfam Udp N-acetylglucosamine O-acyltransferase; Domain 2 28 88 IPR029098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0912 Ahy-Chr12 18319665 18321400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0912 109 159 Protein tyrosine phosphatase (PTP) family AT3G19420 80.392 1.28e-24 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0912 K00677 - ahf:112729790 310.457