Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0887 ATGGGTAGTACCAACAACTTGCACCAATTATTGAGATTATTGTGTTTGAATACTGATTGGAATTCCGCAATCTTTTGGAAGCTCCAACATCGTGCTAGGATGATGCTGACATGGGAGGATGCTTACTATGACAATCCTATTGGTAACGACTCCTCTGAAAACTTGCGCTGCCAGAAGACCTTGGAACAGATTGGCAGTGCGAAGTTTTCCCATGACCCTCTTGGATTGGCCATTGCAAAGATGTCATGTCATGTATATTCATTAGGGGAAGGTATTGTTGGACAAGTAGCTGTTACTGGAAAGTATCGGTGGATCCGTGCAGATAATCTAGTTGCTGACTCTAGCATAGCTTTTGAGTTTGCTGGTGCATGGCAATCTCTGTTTTCTGCTGGAATTAGGACCATTGTCGTTGTAGCAGTAATCCCACTTGGAGTTGTTCAGCTTGGCTCTTTAAATAAGGTTACCGAAGATATGGCAGTTGTAACTAATATAAGAAATCTCTTTTTGTCTACTCAAGATTACACATTAGACTATACACCGAGTCAAATACAAAGTAGCCCCAAAAGCTCTCCATCTCCGGTGGATGCATGTACAAAAGCTTTGTCTTCGAAACTTATGCCTGCATACTTACTTGATACTGAGAACACCATGAAGAGTGAAACACCATACATGTTAATGCCGTTTCAATGTTCCAGGAAGAACGATTCACCTCAAGATATTTATCAGAAAATGGCTGTTGATGTTGCCAAGCACGAGGGATCTGAAATTGGCAAGGACAGAAGTTCCATTTTGCTTCAGTCAATATCAAATATGATGAATCCGGAGTGTCAAAAATTCGTGGAAATGGAACCTGTAAATGAGAGGAAGTGCGAAGGAATGAATATAAGTGTGGAATCAGAAAGAAAAGTCTCATCATTTCCACACAATATGGTTATGGATAATACAAGCTTCAATGATTTGATGCATCCTTTGGAAAAAATCGGAGCTGATTCTGCTTACCCTTCAGACTTTCTTGATGCAGTTGTTTATGCAAGTGACAAGTTACATTGTGTAGATATCAACCAAAATGGGGTGTCAAACGTGCCGAGGTATTCAGATGCAAACTCTCAAAACAATATAGAGAAGTCAAAGTTTAAGAGTGAGCCTTGCTACAATGATGCCGCACACTCGCTGAAGTTTCCTGTTGGCTGTGAACTACATGAAGCCCTTGGGCCTGGTTTTCTAAAAGGAAGTAACTATTTTGATTCGGCAGCTCAGGTTAAACAAGATGATAGGAATGTTGAGGTGCTAGACGAGATTAGCAGTAGCCAGTTGACTTCGCAATCAAATCCAGAGCATCTTCTGGAAGCAATGGTAGCGAACTTATGCAGGAATAGTAATGATATTAATGGCGAGGTATCATTTTCTACTTCGATGCCATCCGCAATGGCCTCAGGAAGAAATACCGAAACTTCTATTCACTCTATGCACACTATTAACTCGGAAGGCTATTCGATAGATCAGTCACCTCTTGTCAAAGAGGAGAAACAGCGCAGCTTGAGTTCCTCGGCAATATGTGGCGTGATGTCCCCAAAAGGATTTTCTTCTCCATGTCCAAGTTCATGTAGTGAGCAATTTGAGAGGTCTTCCGAACCAGCTAAGAACAGCAAGAAAAGGGCTAGGCCTGGGGAAAGTTGTAGGCCAAGGCCAAGGGACAGACAGTTGATCCAGGATCGCATTAAGGAGTTGAGAGAATTGGTGCCGAACGGAGCTAAGTGCAGTATCGATTCACTACTTGAGTGCACGATAAAGCACATGCTTTTCCTCCAGAGCGTAACTAAGCATGCTGACAAGCTAAATAAAGTTGAGGATGCATCAAAGACAAAGCGGCATCACATGGAAACGGATAGTCTCGGTACCTCTAGTTATCAACAGGGTTCAAGTTGGGCAATGGAGGTAGGAGGCCATCTGAAAGTTCGGTCGATATTGGTTGAGAATCTGAACAAGAATGGGCAGATGCTGGTTGAGATGTTGTGTGAAGAGTGCAGCCATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTGGGCCTGACGATTTTGAAGGGTGCAACCGAAGCTCGCGGTGAGAAGACGTGTCTATGTTTCGTGGTTGAGGGTCAAAACAACAGAAATTTACACAGATTGGATATCTTGTGGCCACTTGTTCAGATACTGCAATCAAAGAGCACACTACATTCACAATAA 2223 0.426 MGSTNNLHQLLRLLCLNTDWNSAIFWKLQHRARMMLTWEDAYYDNPIGNDSSENLRCQKTLEQIGSAKFSHDPLGLAIAKMSCHVYSLGEGIVGQVAVTGKYRWIRADNLVADSSIAFEFAGAWQSLFSAGIRTIVVVAVIPLGVVQLGSLNKVTEDMAVVTNIRNLFLSTQDYTLDYTPSQIQSSPKSSPSPVDACTKALSSKLMPAYLLDTENTMKSETPYMLMPFQCSRKNDSPQDIYQKMAVDVAKHEGSEIGKDRSSILLQSISNMMNPECQKFVEMEPVNERKCEGMNISVESERKVSSFPHNMVMDNTSFNDLMHPLEKIGADSAYPSDFLDAVVYASDKLHCVDINQNGVSNVPRYSDANSQNNIEKSKFKSEPCYNDAAHSLKFPVGCELHEALGPGFLKGSNYFDSAAQVKQDDRNVEVLDEISSSQLTSQSNPEHLLEAMVANLCRNSNDINGEVSFSTSMPSAMASGRNTETSIHSMHTINSEGYSIDQSPLVKEEKQRSLSSSAICGVMSPKGFSSPCPSSCSEQFERSSEPAKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLQSVTKHADKLNKVEDASKTKRHHMETDSLGTSSYQQGSSWAMEVGGHLKVRSILVENLNKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGATEARGEKTCLCFVVEGQNNRNLHRLDILWPLVQILQSKSTLHSQ* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0887 740 MobiDBLite consensus disorder prediction 532 568 - -
Ahy12g0887 740 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 5 740 IPR043561 GO:0003700|GO:0006355
Ahy12g0887 740 MobiDBLite consensus disorder prediction 543 568 - -
Ahy12g0887 740 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 168 IPR025610 -
Ahy12g0887 740 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 5 740 - -
Ahy12g0887 740 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 553 602 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0887 Ahy-Chr12 17531828 17539260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0887 1 735 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.593 1.62e-156 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0887 - - adu:107473585 1449.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0887 12 17531828 17539260 Ahy12g0887 12 17531828 17539260 ECH
Ahy12g0887 12 17531828 17539260 Ahy2g0744 2 13234771 13242224 hybridization