Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0857 ATGAATTCTAGAAGAGACGCCCGGAACAGCAGAGTTGCTCTGTTTGACGGCATTGAGGAGGGAGGCATCCGAGCATCATCACTTTACTCCTCCTATAATGAAATTGATGAACAAGATAACGAGCGAGCAATGGGTGGATTGCAAGATAGAGTCAGTCTGTTGAAAAGAATCTCAAGTGATATACACGAGGAGGTGGATAGTCATAACCGGATGCTGGACCGCATGGGGAATGACATGGATTCTTCAAGAGGAGTTCTTTCAGGAACTATGGACAAATTCAAAATGGTCTTTGAGAAAAAATCCAGCCGAAGAACGTTTTCACTTATAGCATCCTTTGTTGTGCTTTTCCTTATAATATACTATTTGACTAGGTAA 375 0.4187 MNSRRDARNSRVALFDGIEEGGIRASSLYSSYNEIDEQDNERAMGGLQDRVSLLKRISSDIHEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFEKKSSRRTFSLIASFVVLFLIIYYLTR* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0857 124 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 34 96 IPR000727 -
Ahy12g0857 124 PANTHER - 1 124 - -
Ahy12g0857 124 PANTHER GOLGI SNARE BET1-RELATED 1 124 IPR039897 GO:0015031|GO:0030173
Ahy12g0857 124 SMART tSNARE_6 29 96 IPR000727 -
Ahy12g0857 124 CDD SNARE_Bet1 37 94 IPR039899 -
Ahy12g0857 124 SUPERFAMILY SNARE fusion complex 30 96 - -
Ahy12g0857 124 Gene3D - 42 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0857 Ahy-Chr12 16592469 16595590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0857 35 123 SNARE and Associated Proteins AT1G28490 28.090 5.68e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0857 K08504 - gmx:100500028 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0857 12 16592469 16595590 Ahy12g0857 12 16592469 16595590 ECH
Ahy12g0857 12 16592469 16595590 Ahy2g0728 2 12687178 12689936 hybridization
Ahy12g0857 12 16592469 16595590 Ahy16g0134 16 1372841 1376106 PCT
Ahy12g0857 12 16592469 16595590 Ahy6g1197 6 17603362 17606589 PCT