Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0850 ATGACCAAGCTTGCATATTTGCATGAGCCGGGAGTGTTGTATAATCTGAAAAATAGATATGACATCAATGAAATATATACTTATACCGGAAATATTCTTATTGCCATCAATCCCTTCAAAAATATTGAAGATCTGTATGATGTTAACGTCATGAAACGTTACAAGGGAGCGGCAGTTGGAGATTTAAGCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGAGCAATGATTAATGAGGAGAAGAACAACTCTATTCTGGTTAGTGGTGAGAGTGGTGCTGGTAAGACAGAAACAACCAAAATGATTATGCAGTACCTGGCATTTTTGGGTGGTCATAATGCATCTGAAGGGCGAACTGTTGAAAAACAAGTTCTAGAATCAAACCCAGTTCTTGAAGCATTTGGTAATGCAAAGACAGTAAAAAATTCCAATTCTAGCCGTTTCGGAAAATTTGTTGAGATTCAATTTGATAAGCATGGACGAATATCCGGTGCAGCCATTAGAACTTATCTACTAGAGAGATCACGTGTATGCCAAATCTCGGATCCTGAGCGTAATTATCACTGTTTTTACCTGCTTTGTGCTTCACCTCCTGAGGACAAAGAGAAATATAAGTTGGGAGACCCTAAATCATTTCACTACCTTAATCAATCCAATTGCTATGAATTAGTTGGCATTAATGCAGCTCAAGAGTATCTTAGCACCAAGAGAGCCATGGAAGTTGTGGGAATAAATCAAGAAGAGCAGGAAGCAATCTTCAGAGTTATAGCTGCTATTCTTCATCTTGGAAACATTAACTTCGCAAAATCAGAGGAAGAAACTGATTCATCAGTTCTAGAAAATGAAGAGTCCAAGTTGCATCTCCAAATAACCGCAGAACTTCTCATGTGCGATCCTAGTGCTTTGGAAGATGCACTTTGTAAGCGTGTGATGATTACCCCAGAGGAAGTTATTAAAAGAAGTCTTGATCCTCTTGGTGCAACGGTTAGCAGGGATGGTTTAGCCAAAACACTATATTCTCGTTTATTTGACTGGTTAGTCCAAAAAATCAATGTCTCAATTGGGCAAGACCCAGAGTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTAAGAATAACAGTTTTGAGCAGTTTTGTATTAATTTCACAAATGAAAAGCTGCAGCAACATTTCAACCAGCATGTGTTTAAGATGGAACAAGAGAGATATACAAAAGAAGGGATTGACTGGAGCTACTTAGAATTTGTGGATAATCAAGATGTACTTGATCTAATTGAAAAGAAACCAGGTGGAATCATTGCTCTTCTTGATGAAGCTTGTATGTTTCCCAAGTCGACCCATGAGACATTTGCAACAAAGCTTTATCAGACATTCAAAGATCACAAACGCTTCATAAAGCCAAAACTGGCACGGTCAGACTTCACTGTTGTACATTATGCAGGCGAGGTCCAATATCAGTCTGAGCAGTTTCTTGACAAAAACAAAGACTACGTTGTTCCTGAACATCAAGACATGCTAAGTACTTCGAGATGTTCATTTGTAACACGACTTTTTCCTCCACTTACTGAGGAGACATCAAAATCTGCGAAGTTTTCTTCTATTGGTTCTCGTTTTAAGCTACAATTACAACAATTGATGGACACACTCAATCTCACAGAGCCTCACTATATTAGATGTGTGAAGCCAAACACTGTTTTACAACCTGCCATATTTGATAATATGAACGTCATCCAACAATTGCGCTCTGGCGGTGTTCTTGAAGCAGTAAGAATTAAGATTGCTGGATTCCCAACTCACAGGACTTTTCAGGAATTTCTAACTCGATTAGGCATTCTTGCTCCAGAGGTTCTTCATGGAAACAACGATGAAAAGGAAGCATGTAAAACGATATTGGAGAAAGCTGGTCTGACAGGATATCAGATAGGGCAAACACAAATATTCTTGAGAGCTGGTCAGATGGCTGAGTTAGATGCTCTGAGAGCACGTTTACTTTACGGTTCTGCAACAGTTATCCAGAAGCACACTAGACGTTATCCTAGACGGAAAGAATATGTTGCATTGTTCAAGTCCTCTATCTTTATGCAATCTATTTGTAGAGGTGAACTGGCTCGGAGAAAATTTTATCACCTGAGGAGGGGCAAGGCTGCAGTCAGAATTCAAAAGCACACACGTGGAAAACTTTCCAGAAAAGAATACAGCAAGATAAAGGTTGCAGCTATATATTTGCAGGCAGCCTTTCGAGCAATGGATGCTCAGGATAAATTAAATAAATTAAGAAATAGGAAGAAAAATTCTGCATCAATCACTATTCAGTCATATTATCGCCGGCATAGAGCTCTCTTGGAATATAAAACCCTTAAGAAATCAGCAATCATTTCACAAAGTGTCAATGATTCCATGGAGAAAGACGAAGACAAGTTATAG 2442 0.3874 MTKLAYLHEPGVLYNLKNRYDINEIYTYTGNILIAINPFKNIEDLYDVNVMKRYKGAAVGDLSPHVFAIAEAAYRAMINEEKNNSILVSGESGAGKTETTKMIMQYLAFLGGHNASEGRTVEKQVLESNPVLEAFGNAKTVKNSNSSRFGKFVEIQFDKHGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCASPPEDKEKYKLGDPKSFHYLNQSNCYELVGINAAQEYLSTKRAMEVVGINQEEQEAIFRVIAAILHLGNINFAKSEEETDSSVLENEESKLHLQITAELLMCDPSALEDALCKRVMITPEEVIKRSLDPLGATVSRDGLAKTLYSRLFDWLVQKINVSIGQDPESKCLIGVLDIYGFESFKNNSFEQFCINFTNEKLQQHFNQHVFKMEQERYTKEGIDWSYLEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFATKLYQTFKDHKRFIKPKLARSDFTVVHYAGEVQYQSEQFLDKNKDYVVPEHQDMLSTSRCSFVTRLFPPLTEETSKSAKFSSIGSRFKLQLQQLMDTLNLTEPHYIRCVKPNTVLQPAIFDNMNVIQQLRSGGVLEAVRIKIAGFPTHRTFQEFLTRLGILAPEVLHGNNDEKEACKTILEKAGLTGYQIGQTQIFLRAGQMAELDALRARLLYGSATVIQKHTRRYPRRKEYVALFKSSIFMQSICRGELARRKFYHLRRGKAAVRIQKHTRGKLSRKEYSKIKVAAIYLQAAFRAMDAQDKLNKLRNRKKNSASITIQSYYRRHRALLEYKTLKKSAIISQSVNDSMEKDEDKL* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0850 813 Gene3D Myosin VI head, motor domain, U50 subdomain 246 536 - -
Ahy12g0850 813 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 1 809 - -
Ahy12g0850 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 696 765 IPR027417 -
Ahy12g0850 813 ProSiteProfiles IQ motif profile. 718 744 IPR000048 GO:0005515
Ahy12g0850 813 ProSiteProfiles IQ motif profile. 741 770 IPR000048 GO:0005515
Ahy12g0850 813 Gene3D - 601 668 - -
Ahy12g0850 813 CDD MYSc_Myo11 10 655 IPR036018 -
Ahy12g0850 813 ProSiteProfiles IQ motif profile. 695 722 IPR000048 GO:0005515
Ahy12g0850 813 Gene3D - 374 558 - -
Ahy12g0850 813 PRINTS Myosin heavy chain signature 83 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy12g0850 813 PRINTS Myosin heavy chain signature 417 445 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy12g0850 813 PRINTS Myosin heavy chain signature 130 157 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy12g0850 813 PRINTS Myosin heavy chain signature 26 45 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy12g0850 813 PRINTS Myosin heavy chain signature 364 392 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy12g0850 813 ProSiteProfiles IQ motif profile. 769 795 IPR000048 GO:0005515
Ahy12g0850 813 Pfam Myosin head (motor domain) 1 655 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy12g0850 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 717 IPR027417 -
Ahy12g0850 813 SMART MYSc_2a 1 668 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy12g0850 813 SMART iq_5 717 739 IPR000048 GO:0005515
Ahy12g0850 813 SMART iq_5 692 714 IPR000048 GO:0005515
Ahy12g0850 813 SMART iq_5 740 762 IPR000048 GO:0005515
Ahy12g0850 813 SMART iq_5 669 691 IPR000048 GO:0005515
Ahy12g0850 813 SMART iq_5 768 790 IPR000048 GO:0005515
Ahy12g0850 813 Gene3D - 186 244 - -
Ahy12g0850 813 ProSiteProfiles Myosin motor domain profile. 1 667 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy12g0850 813 Gene3D - 721 770 - -
Ahy12g0850 813 Gene3D - 670 720 - -
Ahy12g0850 813 Pfam IQ calmodulin-binding motif 720 738 IPR000048 GO:0005515
Ahy12g0850 813 Pfam IQ calmodulin-binding motif 695 713 IPR000048 GO:0005515
Ahy12g0850 813 Pfam IQ calmodulin-binding motif 771 790 IPR000048 GO:0005515
Ahy12g0850 813 Gene3D Kinesin motor domain 1 597 IPR036961 -
Ahy12g0850 813 PANTHER MYOSIN 1 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0850 Ahy-Chr12 16391225 16397568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0850 1 801 Myosins gene family AT1G08730 71.785 0.0 1224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0850 K10357 - gmx:100803485 1349.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0850 12 16391225 16397568 Ahy12g0850 12 16391225 16397568 ECH
Ahy12g0850 12 16391225 16397568 Ahy2g0720 2 12468633 12475077 hybridization