Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0819 ATGGCTGAGAGTGGATATGAAATGTTGGATGAAGAAGCCGGTGACTATGGAGATGTATTGCAGTTGAGTAAGGAAGAGATAATGAATAAGGCATTCCGAAGCGATGAAGCAGCATATGAATTTTACAGGAGGTTAGGCAAATATTTTGGTTTTGGTATTCGAAAGGGTGACTCGGGAAAAGATGAAAGTGGAAGGGTTATTTGTCGTAGATTTTTTTGTAATAGAGCGGGCCTGAGACAACGTCATCACTATGATAGGCTAGATAGGCAGAGAGGTCATAGACCAGAAATGCAGACAAATTGTGAGGCAAAGCTGTCAGTCTACCTTGATGTGGTCAGTGGTATATGGAGGGTGAGGAAAATAGTATTGGATCATAACCATGATTTAACTCCGGCATATATGGTTCATATGATGATGAATTTTAGAGAAATAAGTTGTTTTGCTAAGGCACAAATATCTGGTATGCAGGCTCATGTTGTTCCGACGTCTAAGATTTTGGGGTATATGGCTGGACAGTCTAGTGGCTATTCTCTAATGGGCTTCACTAAGAAGGATGCTTACAATTATATTAACAAGGCTAAGCGTGCAAAGATTATTGATGGGGACGCTAACGCCGCTGTTGTATACTTGGAGGGGAAAGCGGGGGCAGATCCGATGTCGATGGCTAGGTATAATCTTACTAAGGATAATATGCTAGCCAATATGTTTTGGGCGGATGGTGGCAGTAGAGTTGATTACCAATACTTTGGGGATGTTCTAGCCTTTGATTCGACCTACAAGAAAAATAAATATCAGAGACCGCTGGTGATATTTTCTGGTGTTAATAACCATAAGCAGACGACAATATTTGGGTTTGTCTTGGTGTTAGATGAAAGCGTTGGGTCTTATAAGTGGTTGCTAGAAAATTTGTTGGAAGTCAGGTGTAACAAGAAGCCGTCGGTTGTCGTCACGAATGGCTGTGATTCAATGAAAGCTGCAATCAAGTCTATTTTTCCAGAGGCAACGCATCAATTGTTCTTGGCATATGGAGGAGAACGTAACCGCTAA 1047 0.4145 MAESGYEMLDEEAGDYGDVLQLSKEEIMNKAFRSDEAAYEFYRRLGKYFGFGIRKGDSGKDESGRVICRRFFCNRAGLRQRHHYDRLDRQRGHRPEMQTNCEAKLSVYLDVVSGIWRVRKIVLDHNHDLTPAYMVHMMMNFREISCFAKAQISGMQAHVVPTSKILGYMAGQSSGYSLMGFTKKDAYNYINKAKRAKIIDGDANAAVVYLEGKAGADPMSMARYNLTKDNMLANMFWADGGSRVDYQYFGDVLAFDSTYKKNKYQRPLVIFSGVNNHKQTTIFGFVLVLDESVGSYKWLLENLLEVRCNKKPSVVVTNGCDSMKAAIKSIFPEATHQLFLAYGGERNR* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0819 348 PANTHER OS02G0262500 PROTEIN 26 339 - -
Ahy12g0819 348 Pfam FAR1 DNA-binding domain 40 130 IPR004330 -
Ahy12g0819 348 Pfam MULE transposase domain 252 338 IPR018289 -
Ahy12g0819 348 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 339 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0819 Ahy-Chr12 14972934 14973980 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g0819 FAR1 6.90E-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0819 - - aip:110265238 538.11