Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0818 ATGGCAGAGGTGATTGGAACATTTATTTTGATGTTGTGTGTAAGTGGAATAATAGCAAGCACAAAATTCCAAAATGGTGAAGTGGGGCTTCTAGAGTATGCAGCCACAGCAGGATTAACAGTGGTTGTTATCATCTTCTCCATAGGACCAATTTCTTGTGCACATGTCAACCCAGCTGTCACAATTGCCTTTGCCACAATTGGTCATGTTCCATGGTACAAGGTTCCAATTTACATAATAGCACAGATAGTAGGTTCTATATTTGCCACATTTATAGGTAGCCTTGTTTATGGCATAAAATCAGAGGTTATGATCACAAGGCCAATCCAAGGTTGCAACTCTGCATTGTGGGTTGAACTCATTGCAACTTTCATCGTCATGTTCCTTGTTGCAGCTTTGACATCTGAGCATGAATCAGTTGGGCATTTATCTGGCTTTGTTGCTGGAATTGCAATTGGTCTTGCTGTACTAATCACAGGTTACTGA 486 0.4074 MAEVIGTFILMLCVSGIIASTKFQNGEVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATIGHVPWYKVPIYIIAQIVGSIFATFIGSLVYGIKSEVMITRPIQGCNSALWVELIATFIVMFLVAALTSEHESVGHLSGFVAGIAIGLAVLITGY* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0818 161 PRINTS Major intrinsic protein family signature 145 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy12g0818 161 PRINTS Major intrinsic protein family signature 37 61 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy12g0818 161 PRINTS Major intrinsic protein family signature 118 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy12g0818 161 PRINTS Major intrinsic protein family signature 74 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy12g0818 161 PANTHER AQUAPORIN NIP7-1-RELATED 1 160 - -
Ahy12g0818 161 ProSitePatterns MIP family signature. 55 63 IPR022357 -
Ahy12g0818 161 Pfam Major intrinsic protein 1 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy12g0818 161 PANTHER AQUAPORIN NIP2-1 1 160 IPR034294 -
Ahy12g0818 161 Gene3D Glycerol uptake facilitator protein. 1 161 IPR023271 -
Ahy12g0818 161 SUPERFAMILY Aquaporin-like 1 160 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0818 Ahy-Chr12 14925126 14936683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0818 2 160 Major Intrinsic Protein MIP AT1G80760 39.623 8.75e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0818 K09874 - mtr:MTR_1g070385 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0818 12 14925126 14936683 Ahy2g0699 2 11545076 11550871 hybridization