Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0810 ATGGAGAATTGTAGCTATGAGAAAGTAGGTTTGAACCTTGAGGCAACAGAGTTGAGGTTGGGTTTGCCAGGCAGTGCTGATGAACATGATGAGAAACTCTCGTCATGTAGTTACTCATCATCATCATCATCAAGTGTTGTTATTAGAAGCAACAAGAGATCTTCACCTGAAGAATCCATTGATGATGAGGAAGAGCTCAAAAGCAACAAGAGAACCATGATTTCTCATCATAATGATGACCAAGACAAAAATGTCCCACCCTCAAAAGCACAGCAAGTAGTAGTGGGGTGGCCACCAATTAGATCTTACAGGAAGAACAATGGTGTACAACAACAACAAGAACAAAAGAAGAAGGGAGAAGAGGTTGATGGGGTTGGTATGTATGTGAAAGTGAGCATGGCAGGTGCACCTTACTTGAGGAAGATTGATCTCAATTTTTACAACACCTACCAAGAATTACTCATGGCTTTGGAAAATATGTTCAAGTGCACTTTTGGTGAATATTCAGAAAGAGAAGGCTACAATGGATCTGAATTTGCTCCAACTTATGAAGACAAAGATGGTGATTGGATGTTGGTTGGAGATGTGCCATGGAACATGTTCATTTCTTCCTGCAAGAGGCTAAGGATTGTGAAAGGATCAGAAGCTAAGGGATTGGGTTGTTTATGA 669 0.4066 MENCSYEKVGLNLEATELRLGLPGSADEHDEKLSSCSYSSSSSSSVVIRSNKRSSPEESIDDEEELKSNKRTMISHHNDDQDKNVPPSKAQQVVVGWPPIRSYRKNNGVQQQQEQKKKGEEVDGVGMYVKVSMAGAPYLRKIDLNFYNTYQELLMALENMFKCTFGEYSEREGYNGSEFAPTYEDKDGDWMLVGDVPWNMFISSCKRLRIVKGSEAKGLGCL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0810 222 MobiDBLite consensus disorder prediction 35 53 - -
Ahy12g0810 222 MobiDBLite consensus disorder prediction 54 70 - -
Ahy12g0810 222 ProSiteProfiles PB1 domain profile. 126 218 IPR000270 GO:0005515
Ahy12g0810 222 Gene3D - 120 222 - -
Ahy12g0810 222 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 220 IPR003311 GO:0005634|GO:0006355
Ahy12g0810 222 Pfam AUX/IAA family 15 220 IPR033389 -
Ahy12g0810 222 SUPERFAMILY CAD & PB1 domains 124 210 - -
Ahy12g0810 222 MobiDBLite consensus disorder prediction 24 70 - -
Ahy12g0810 222 PANTHER AUXIN-INDUCED PROTEIN 4 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0810 Ahy-Chr12 14610432 14611944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0810 129 219 B3 DNA Binding Superfamily AT2G46530 38.462 8.73e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Ahy12g0810 AUX_IAA 2.60E-62 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0810 K14484 - gmx:100792134 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0810 12 14610432 14611944 Ahy9g1375 9 58110916 58115404 hybridization
Ahy16g0163 16 1743187 1744618 Ahy12g0810 12 14610432 14611944 PCT
Ahy6g0106 6 1424841 1426252 Ahy12g0810 12 14610432 14611944 PCT
Ahy12g0810 12 14610432 14611944 Ahy16g0163 16 1743187 1744618 PCT
Ahy12g0810 12 14610432 14611944 Ahy6g0106 6 1424841 1426252 PCT