Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0775 ATGGAGAAGTATGAGATTCTTCAACAGATTGGCAAAGGTTCCTTTGGTTCTGCTCTTCTTGTTAGGCACAGACATGAAAACAGAAAGTATGTACTCAAGAAGATCAAACTTGCTCGCCAAACTGACAGAACTCGTAGATCTGCTCATCAAGAGATGGAACTCGTCTCTAAAGTTCGAAATCCATTTATCGTGGAATATAAAGATTCCTGGGTAGAAAAGGGTTGTTTTGTATGTATCATCATCGGCTATTGTGAAGGCGGAGATATGGCTGAAGCTATAAGAAAGTCTAATGGTATTCATTTTTCCGAAGAGAAGCTTTGTAAGTGGCTTGTTCAACTGCTGATGGCACTTGATTACTTGCATACGAATCATATTCTGCACCGTGATGTCAAGTGTTCAAATATATTCTTGACAAAAGATCAAGATATACGTCTAGGTGACTTTGGTCTTGCTAAAATGTTGACATGTGATGATCTTGCTTCCTCGGTTGTCGGGACTCCAAGTTATATGTGTCCGGAGCTTCTTGCTGATATACCTTATGGCTCTAAGTCAGATATCTGGTCTTTAGGATGCTGTGTTTATGAAATGGCTGCACATAAGCCAGCTTTCAAAGCTCTTGATATGCAAACATTGATTAATAAAATAAACAAGTCTTTAGTGGCTCCACTACCAACCATGTATTCCAGTCCATTTCGAGGGCTTGTCAAGAGTATGCTGCGGAAAAATCCAGAGCTTAGGCCAAGTGCTGCAGAGTTACTAAATCATCCACATCTTCAGCCTTATATTCACAAAATTCACCTGAAACTCAATACCCCAAGAAGAAGTACTTTTCCCTTCCAGTGGCATGATTCGAGTTACTTAAGGAGAAACCGCTTTTTCGAGCCAGAATCTGTTTCTACTATTTCAGACAGACACAAAAGATTATCCTTTAGCAATGACAGAGCTTTGAATCCTAGTATTTCTGGAACTGAAGTAGGTTCTCTCTGTTCTGCTCAAAGAGCACAAGGATCCTTCACTTATTCAAAAGAGAGATTGTATGATCTTTCTGTTGGTTGTGTCCGGGAAGAGTTGAATGCTAACAAGTCGAAAGCAGCAAAGTTCTCAGCTTTCGACAGGACACCAAGATCGCAAGCAGGGAAGATTTCCACCCCGAGACGGCCGATAATACCGTCGATATCACATACTAGCTCCAAGCGTGATTCACTTCCAGCATCTCCGGCCGCAAAGTTCGCCCCACCAACTCGTCGAGCATCTCTTCCACTTCTTACACCTTCAACTGGAGTCATGGCAACAGCTACCCCTTACAGAGCCAGCATTGGCCTTCTAAGAAGCCTGGACTCACCAGATATTTCTGTCAATGCACCACGAATCGACAAGATGGCAGAGTTCCCTCTAGCATCCTGCGAGGGCAATCATTTCTTCCCCGTTCGTGGCACCTCATCAACGTCGGCTCATTGCTCGTCTAGCTCCCCCGGTAGCGCCGAATGCTCATTCACAAAAGACAAGTGTACAGTCCAAGTTGTGGACAAGGCCAGTGTCCCTACTATTACCACTGGTGTTAATAGCACTCCAGCTCCGGTCTCTCACGGCAGTGAATGCTCTGAGCCCGGGGCAACTATTGTTTCAAGCCATTCCTCGGCTGACTCTCGTCAGCGCAGGTTCGACACCTCGTCGTACCAGCAGCGCGCGGAGGCGTTGGAAGGGTTGCTGGAGTTCAGTGCAAGGCTCCTACAGCAACAGAGGTTTGAAGAGCTTGGTGTGTTGTTGAAACCATTTGGACCTGAGAAGGTTTCACCAAGGGAAACAGCTATTTGGTTGACTAAGAGCTTCAAAGAAACTGCGGCATAA 1848 0.4502 MEKYEILQQIGKGSFGSALLVRHRHENRKYVLKKIKLARQTDRTRRSAHQEMELVSKVRNPFIVEYKDSWVEKGCFVCIIIGYCEGGDMAEAIRKSNGIHFSEEKLCKWLVQLLMALDYLHTNHILHRDVKCSNIFLTKDQDIRLGDFGLAKMLTCDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMAAHKPAFKALDMQTLINKINKSLVAPLPTMYSSPFRGLVKSMLRKNPELRPSAAELLNHPHLQPYIHKIHLKLNTPRRSTFPFQWHDSSYLRRNRFFEPESVSTISDRHKRLSFSNDRALNPSISGTEVGSLCSAQRAQGSFTYSKERLYDLSVGCVREELNANKSKAAKFSAFDRTPRSQAGKISTPRRPIIPSISHTSSKRDSLPASPAAKFAPPTRRASLPLLTPSTGVMATATPYRASIGLLRSLDSPDISVNAPRIDKMAEFPLASCEGNHFFPVRGTSSTSAHCSSSSPGSAECSFTKDKCTVQVVDKASVPTITTGVNSTPAPVSHGSECSEPGATIVSSHSSADSRQRRFDTSSYQQRAEALEGLLEFSARLLQQQRFEELGVLLKPFGPEKVSPRETAIWLTKSFKETAA* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0775 615 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Ahy12g0775 615 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0775 615 CDD STKc_Nek 3 258 - -
Ahy12g0775 615 MobiDBLite consensus disorder prediction 521 553 - -
Ahy12g0775 615 PANTHER SERINE/THREONINE-KINASE NEK4 1 604 - -
Ahy12g0775 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Ahy12g0775 615 MobiDBLite consensus disorder prediction 370 411 - -
Ahy12g0775 615 Gene3D Transferase(Phosphotransferase) domain 1 84 276 - -
Ahy12g0775 615 MobiDBLite consensus disorder prediction 388 402 - -
Ahy12g0775 615 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 604 - -
Ahy12g0775 615 MobiDBLite consensus disorder prediction 521 547 - -
Ahy12g0775 615 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0775 615 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Ahy12g0775 615 SUPERFAMILY Protein kinase-like (PK-like) 1 318 IPR011009 -
Ahy12g0775 615 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0775 Ahy-Chr12 13688806 13694840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0775 10 259 MAP Kinase Kinase Kinase AT1G53570 30.196 7.18e-36 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Ahy12g0775 Pkinase 1.20E-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0775 K08857 - gmx:100810347 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0775 12 13688806 13694840 Ahy12g0775 12 13688806 13694840 ECH
Ahy12g0775 12 13688806 13694840 Ahy9g1392 9 61485882 61493352 hybridization
Ahy16g0187 16 1970324 1974339 Ahy12g0775 12 13688806 13694840 PCT
Ahy6g1137 6 16628005 16632236 Ahy12g0775 12 13688806 13694840 PCT
Ahy12g0775 12 13688806 13694840 Ahy16g0187 16 1970324 1974339 PCT
Ahy12g0775 12 13688806 13694840 Ahy6g1137 6 16628005 16632236 PCT