Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0757 ATGATATCTCACTGTCTCCATTTTGTGCAGGAACTTCTGATTGCTTTTTCTTTGAAAATGATGGCTACTCCAACTAAACCAATGGCCGTAATGTTGTCTGAATCTTTGGAACACAAGGGAAAGGATATCACTGAATTAAATGGTAACATACTTCAATCCCCTATAAGTCAACAGCCCCATAGCTCCTCTGATGGTTCAGTAGCTATTCTTTGGGACATCGAAAACTGTCCTGTTCCAAGTGATGTCCGCCCTGAAGACGTAGCAGGAAATATAAGGATGGCGTTGCAAGTGCATCCACTAATTGAAGGAACTGTTATGGTATTTTCTGCTTATGGTGACTTCAACGCTTTCCCTAAGCGACTTAGAGAGGGATGTCTAAGAACTGGTGTTAATCTCATTGATGTTCCTAATGGGAGAAAAGATGCTGCTGATAAAGCAATCTTGGTTGACATGCTTTTATTTGCTCTTGACAACCCTCCCCCATCATCTATTATGCTAATATCTGGAGACGTTGACTTTGCCCGAGCACTTCACATTCTTGGACAACGGGGATACACTATAATTCTTGTCATCCCTTCTCGGATGGGTGTTTCATCTGCTTTATGCAATGCCGGAATGTTTGTCTGGGATTGGCCTAACGTTGCTCGTGGAGAAGGATTTGTTCCCCCTCGTGGAGGTTCAGTTGAGGTTGCTGGATATTTGATGGGGTGCCATATTAATGACAACTTGGAGGGACAAAATGAGGAAGAAGCAATAGTTTATAGAGGGATGTCACAGAGATTATATAACTCAAGGGATTTCTCTATGGTTTCACAATCTCTATCTGAATACAATTATACCGCATCGAACATGGCTGGCTTACTGACAACTATGAGATCACACAGCCTTCTTCCACCTGGGATGATTGATGTTTCAGGAATATCTATGCCTTCTAGTGACAATAATGAAGGCCAGCTTTGGGGCCCTATGTCTAGCGATTTAAATGTTCTCAAAGGCCAGTTGGTAAAGTTGCTTGAACTTTCTGGAGGGTGCCTGCCTCTGGCTCGAGTTCCAACAGAGTATCAGAAAGCTTATGGAAGAACTCTTTATGTATCTGATTATGGAGCAATTAAGTTAGTCAATCTTTTCAAGAAGATGGGTGATACAATGGCAGTGGAAGGGAAAGGTCAACGTAAATTTGTGTATCTCAGAAACTTCAAGAAAGACAAGAAAGGAAAGGGGCTTCCAGAGGAGAATACGAATACTGTCGCCGGTGGTGGCTCTTCAGATGAGTTCTCAGATGAAGAAAGACTAGTCATGGAAGAACATGATGAGAGCAGTCAAAGGAGAGCAGCTATCAATGACCGTGCTCTTGAGCAGTTCAAGTTCGAGCTTCAAGAGATTCTAGTCAGCTACTCGTGTCGAATATTCCTAGGTTGTTTTGAGGATATATACCAACAAAGGTACAAGAGACAATTGGAATATGAGAAACTTGGAGTGAACAAGTTGGAGGATTTGTTTGAGAAAGTCAATGATATTGTAGTATTGGTTGAGGAAGCAGGAAGCAAGAGGAAGTTCCTTGATCCAGTGGGGGGTTAG 1578 0.4233 MISHCLHFVQELLIAFSLKMMATPTKPMAVMLSESLEHKGKDITELNGNILQSPISQQPHSSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALQVHPLIEGTVMVFSAYGDFNAFPKRLREGCLRTGVNLIDVPNGRKDAADKAILVDMLLFALDNPPPSSIMLISGDVDFARALHILGQRGYTIILVIPSRMGVSSALCNAGMFVWDWPNVARGEGFVPPRGGSVEVAGYLMGCHINDNLEGQNEEEAIVYRGMSQRLYNSRDFSMVSQSLSEYNYTASNMAGLLTTMRSHSLLPPGMIDVSGISMPSSDNNEGQLWGPMSSDLNVLKGQLVKLLELSGGCLPLARVPTEYQKAYGRTLYVSDYGAIKLVNLFKKMGDTMAVEGKGQRKFVYLRNFKKDKKGKGLPEENTNTVAGGGSSDEFSDEERLVMEEHDESSQRRAAINDRALEQFKFELQEILVSYSCRIFLGCFEDIYQQRYKRQLEYEKLGVNKLEDLFEKVNDIVVLVEEAGSKRKFLDPVGG* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0757 525 Gene3D - 324 395 IPR041966 -
Ahy12g0757 525 Gene3D - 446 520 IPR041966 -
Ahy12g0757 525 PANTHER - 31 520 - -
Ahy12g0757 525 Pfam OST-HTH/LOTUS domain 451 515 IPR025605 -
Ahy12g0757 525 Pfam OST-HTH/LOTUS domain 328 393 IPR025605 -
Ahy12g0757 525 ProSiteProfiles OST-type HTH domain profile. 326 398 IPR025605 -
Ahy12g0757 525 ProSiteProfiles OST-type HTH domain profile. 450 524 IPR025605 -
Ahy12g0757 525 Gene3D - 59 211 - -
Ahy12g0757 525 MobiDBLite consensus disorder prediction 405 424 - -
Ahy12g0757 525 PANTHER LIMKAIN B LKAP 31 520 IPR024768 GO:0005777|GO:0010468|GO:1903231
Ahy12g0757 525 CDD LOTUS 451 517 - -
Ahy12g0757 525 Pfam NYN domain 67 204 IPR021139 GO:0004540
Ahy12g0757 525 CDD PIN_limkain_b1_N_like 67 192 - -
Ahy12g0757 525 CDD LOTUS 327 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0757 Ahy-Chr12 13166262 13168076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0757 65 217 C2H2 Transcription Factor Family AT5G61190 44.444 4.40e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0757 - - ahf:112715639 948.347