Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0689 ATGAACAACATAAATCATGAGCCGATATCGACATCAACCAATCGTGAATCGGCGATGCCAGACCCGGAGGACGGGCTTTTAAATGAGGAGACACTTTTTGACATGAGCATGTTAGGGAATGAAGCAGGGTTTCCGAATATGATGCAGACAGACATAAAGCTTCAATCTGCTCAGGTACCAAGTCATGTCAGTGTTGAAGATATGCTGAAGATGGAGTTCTGTACCGTTGGGGAAGCAAGAGAATTATACACGAGTTATAGTAAGCTAAAAGGTTTTGCAATAAGAAAGAGTAAGAGGGTAAAAAATGCCAAAGGAGAGATCGTTAGATACACTTTTGTTTGCAACAGACAAGGGTTTAGGCACAAGAAGTGGTTAGATAAGCTGGATAGGAAAAAAGAGCACAAGCCTATAACGCGATGCAGGTGTGTAGCAGAGATGAGGATAAAGAAGAATCATACTAATAGAAAATGGTTTGTTTCACAGTTTGGGGATGATCATAACCACACCCTACTCTCTGAAAGGTTTATTAGATATCTGCCTTCACACAAGAATATGTCTGATGTAGAAATTGCTCAAATGAATAGCATGAGGCAAGTTAGGATAAGTGTAAGACCCGGTTAA 621 0.4042 MNNINHEPISTSTNRESAMPDPEDGLLNEETLFDMSMLGNEAGFPNMMQTDIKLQSAQVPSHVSVEDMLKMEFCTVGEARELYTSYSKLKGFAIRKSKRVKNAKGEIVRYTFVCNRQGFRHKKWLDKLDRKKEHKPITRCRCVAEMRIKKNHTNRKWFVSQFGDDHNHTLLSERFIRYLPSHKNMSDVEIAQMNSMRQVRISVRPG* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0689 206 Pfam FAR1 DNA-binding domain 82 171 IPR004330 -
Ahy12g0689 206 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 59 194 - -
Ahy12g0689 206 MobiDBLite consensus disorder prediction 1 23 - -
Ahy12g0689 206 MobiDBLite consensus disorder prediction 1 18 - -
Ahy12g0689 206 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 59 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0689 Ahy-Chr12 11165775 11166513 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g0689 FAR1 8.50E-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0689 - - aip:107626815 424.091